| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3130 |
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| Symbol | |
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| ID | 8378825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3545681 |
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| End bp | 3546922 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645002365 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_003159621 |
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| Protein GI | 256830893 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAGA CGTATCCGGA ACAGCTTTAC GACAAGTTTT TTGTCGCCCG TCAGCCCATA
TTCACGGCAC AGATGCAGAT ATGGGGCTAT GAGCTGCTTT TCCGTCACGG AGAAAACATT
CAGGAGGCGG TGTTCACGGA CGGGGACCAG GCCACGACGC AGATCATAGC CGACGGCTAC
AATCTTGCGG TGCAGGGGCT GCGCAAGGGA GCCAAGGCTC TGGTCAATTT TCCGCGCACC
CTCCTCGTCG GCCGGGCGCC CTATGTCCTG CCTGCCGACC AGTGCGTGGT GGAGATCCTG
GAGACCGTAA GGCCAGAGCC CGAAGTCATC AGCGCCTGCC GGGAGCTCAA GAAGAGGGGA
TACACCCTTG CTCTGGATGA TTTTGAAGGC GGACCGGGCC TTGAACCCTT GTGCGAGATG
GTCGACATCA TCAAGATCGA CATCCTGGGC AAGACTCCGG CCGAGGTTGT GGCCATTATG
GAGGGTGTCA AAAAGTACGA TGCGACGCTG CTGGCCGAGA AAGTGGAGAC CCTCGACGTT
TTCAGGGTTT GCAAGCAGCT CGGCTTTACG TATTTTCAAG GTTTTTTCTT CAATCGCCCC
GAGGTGATCC CCGGGCGAAA ACTTTCTGCC ACGCAAGTCA ACAAGGTCAA GCTGTTAAAG
GAATTGAGCG TCCCGGACGT GGATTCCTCC CGTTTGGTGG AAATCATCCA GACGGATCTG
GCCATTTCCT ACCGGTTGCT CAAATACATA AATTCCGCAT TTTTCGGTCT GCAGATCAAG
ATCACGTCCA TTCCGCGCGC AGTTTCCATG CTCGGATGCC GTAACCTGCG GCAATGGCTG
CAGGTGGTCA TCCTGTCCGA TGTGAGCACA CAGGACAAGG CGCACGAACT GGTCCGCATT
TCCGTGCAAC GTGCCCGTTT TCTGCACCTT TTGGCCCACA GGCACCCCAC GCCCTTTGAC
CAGGACAGCA TGTTCCTGCT GGGCTTTTTC TCCCTGCTCG ACGCCATTCT GGACCAGTCC
ATGGGGCTGG TGCTGGAGGA GATTCCTTTG GAGCCGGGCA TCAAGCGGGC CCTGATTGAT
CCGGATGATC CGAGTGCGGT CTGGCTCGAC TTGCTTGACG AGATAGATCG CTGCAACTGG
GACCGTCTGA GCAGGAAGGC TGCGCAGCTG GGGGTTCCCA TCGATCTCGT CAACAGGCTC
TCCGCCGAGG CCTCGATCTG GGCGGTCTGG GTCATGAGTT GA
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| Protein sequence | MEETYPEQLY DKFFVARQPI FTAQMQIWGY ELLFRHGENI QEAVFTDGDQ ATTQIIADGY
NLAVQGLRKG AKALVNFPRT LLVGRAPYVL PADQCVVEIL ETVRPEPEVI SACRELKKRG
YTLALDDFEG GPGLEPLCEM VDIIKIDILG KTPAEVVAIM EGVKKYDATL LAEKVETLDV
FRVCKQLGFT YFQGFFFNRP EVIPGRKLSA TQVNKVKLLK ELSVPDVDSS RLVEIIQTDL
AISYRLLKYI NSAFFGLQIK ITSIPRAVSM LGCRNLRQWL QVVILSDVST QDKAHELVRI
SVQRARFLHL LAHRHPTPFD QDSMFLLGFF SLLDAILDQS MGLVLEEIPL EPGIKRALID
PDDPSAVWLD LLDEIDRCNW DRLSRKAAQL GVPIDLVNRL SAEASIWAVW VMS
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