Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_3117 |
Symbol | |
ID | 8378812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3527790 |
End bp | 3530024 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645002352 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_003159608 |
Protein GI | 256830880 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGTTA TGAAAATGCC GGCTGATCTG CCCGACGTGA GTCTCAATTC CAACGCCGAG TTGGTGCTCA AAAAACGTTA CCAGCGCAAA GGACTGGACG GAACGCCCAT TGAGACAGCG AAGGAAATGT TCTGGAGAGT GGCGGCAAGC ATAGCATCCA TGGAAAAGAA CTACCCGTCT TCGCCTTTCA AACCCAAGGA TCTGGCCCGC ACGTTTTACT CCTTGATGAC CGAGTACGAT TTTCTGCCCA ATTCCCCGAC CCTCATGAAC GCCGGCACGG AACTGGGACA ACTGGCGGCC TGCTTCGTAT TGCCTGTCGG CGACTCCATG GACGAGATCT TCGACGCGGT GAAGAACGCG GCGCTGATCC ACAAGTCCGG CGGCGGCACG GGCTTTTCCT TCACCCGTCT GCGTCCCAAG GACAGCCGGG TCGGTTCCAC CGGCGGCGTT GCTTCGGGCC CCATCTCCTT TCTCAAGATT TTCAACACGG CCACCGAGCA GGTCAAACAG GGTGGAACCA GGCGCGGAGC CAACATGGGC ATCCTGCGCG TCGACCATCC CGATATCCTG GAATTCATCC GGGCCAAGGA ACGCGAGGGG GACCTCAATA ATTTCAACCT GTCCGTGGCC CTGACCGAAA AATTCATGCA GGCCGTGGAG AATGACGAGG AATATCCCCT TGTCGCCCCC CAGTCGCAGG AAGTCATCGA AAAGCTCAAA GCCCGCGAAG TCTTCGAGCT CCTGGTGCGC AAGGCCTGGG AGAGCGGAGA TCCGGGAATC ATCTTCATCG ACCGCATCAA CCGCGACAAC CCCAATCCGG ACCAGGGCGA GATCGAGAGC ACCAACCCTT GCGGCGAACA GCCCCTGCTG CCTTACGAGG CCTGCAACCT CGGTTCCATC AATCTGGCCC GTTTCGTGCG CGAAAAGGAC GAGGGCGTTG AAATCGACTG GGACAGGCTG CGTGAAGTGG TGCATTTGAG CGTACGCTTT CTGGACAACG TCATCGACGC TTCGGAATAC CCGCTGGACC GCATCACGGA GACTGTGCGC AAGAACAGAA AGATCGGGCT TGGAGTAATG GGCTGGGCCG ATCTTCTGTA CCAGTTGGGC CTGCCCTACG ACAGCCGCCG GGCCATCGTG CTCGCCGAGC AGATGATGAA TTTCATCCAA AAGGAAGCCA GATCCGCTTC CAAGGAACTG GCCAAGGAGC GTGGTCCCTT TCCGTCCTAC GAGACCTCCA TCTACAAGGA ACAGAATCTG GGGCCTTACC GCCATGCCAC GACCACGACC ATTGCCCCCA CAGGCACCCT GTCCATCATC GCCGGATGTT CCTCCGGGGT GGAGCCTCTT TTCGCCCTGT GCTTCGTGCG TCAGGTCATG GACGGCGAAA AGCTGACCGA GGCCAACAGC TTTTTCGTCA AAGCCCTGCA CGACCAGGGA TGCTATTCCG AAAAGCTCAT GGCCGAGGTG ATTGAAAAAG GCTCGGTCAA GAACATGGAT TTTCTCCCTG AAGAGCTCAG GAACGTCTAC GTGACTTCCA TGGACATCGA GCCGCAGTGG CATCTGAAGA TGCAGGCGGC CTTCCAGAAG CACACCGACA ATGCCGTCTC CAAAACGGTC AACCTGCCCA ATTCCGCTAC CCAGGAAGAC ATCTACCAGA TCTATTGGAT GGCCTACGAA GAAGGCTGCA AAGGCGTCAC GGTTTACCGC GACGGCTGCA AGAGCGTGCA GGTCCTGTGC ACCGGAGATG GCAATAAGGA AGAGAAGAAG AGTGACGAGT GCCGCCCCAT GGACCGGCCC GACATCGTCT ACGGATTCAC GCAGAAGGTC CGCACGGGCC TTGGCGACCT GTATCTGACG GTCAACGAGG TCAACGGCAA GCCTTTCGAG GTTTTCACCA CCATCGGCCG CTCGGGCAGA TCCATCACCG CCAAGGCCGA AGCCATTGGC CGGCTGGTTT CCCTGGCGCT TCGCTCGGGC GTGCATGTTC GTGAAATAGT CAAGCAGCTC AAAGGGATCG GAGGGGAGCA TCCGGTTTTT CAGAAAAAGG GCATGCTCCT TTCCATTCCC GATGCGGTAT CCTGGGTGCT CGAAAACAAG TATCTGCAAG GTACCACTCC GAGCAGTTCC TACAAATCCC TGTCCAAGAC CGAATGCCCC GAATGCATGA CGGAGCTGGT CTTTCAGGAA GGGTGCTTTG TCTGTCCGTC CTGCGGCTTC ACCAAGTGTG GATGA
|
Protein sequence | MDVMKMPADL PDVSLNSNAE LVLKKRYQRK GLDGTPIETA KEMFWRVAAS IASMEKNYPS SPFKPKDLAR TFYSLMTEYD FLPNSPTLMN AGTELGQLAA CFVLPVGDSM DEIFDAVKNA ALIHKSGGGT GFSFTRLRPK DSRVGSTGGV ASGPISFLKI FNTATEQVKQ GGTRRGANMG ILRVDHPDIL EFIRAKEREG DLNNFNLSVA LTEKFMQAVE NDEEYPLVAP QSQEVIEKLK AREVFELLVR KAWESGDPGI IFIDRINRDN PNPDQGEIES TNPCGEQPLL PYEACNLGSI NLARFVREKD EGVEIDWDRL REVVHLSVRF LDNVIDASEY PLDRITETVR KNRKIGLGVM GWADLLYQLG LPYDSRRAIV LAEQMMNFIQ KEARSASKEL AKERGPFPSY ETSIYKEQNL GPYRHATTTT IAPTGTLSII AGCSSGVEPL FALCFVRQVM DGEKLTEANS FFVKALHDQG CYSEKLMAEV IEKGSVKNMD FLPEELRNVY VTSMDIEPQW HLKMQAAFQK HTDNAVSKTV NLPNSATQED IYQIYWMAYE EGCKGVTVYR DGCKSVQVLC TGDGNKEEKK SDECRPMDRP DIVYGFTQKV RTGLGDLYLT VNEVNGKPFE VFTTIGRSGR SITAKAEAIG RLVSLALRSG VHVREIVKQL KGIGGEHPVF QKKGMLLSIP DAVSWVLENK YLQGTTPSSS YKSLSKTECP ECMTELVFQE GCFVCPSCGF TKCG
|
| |