Gene Dbac_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3096 
Symbol 
ID8378791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3505866 
End bp3507020 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content58% 
IMG OID645002331 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_003159587 
Protein GI256830859 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00256745 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTGA AAGTGCGTAA GGAAGAGGTC ATTGACGGGC TGCTCAAGGC CTCGAACATC 
ATTCCGTCAA AAACCGGCGC GGCCTATCTG CGCACGGTCT GGCTCAAGGC CGAAGGAGAC
ACCATTTCCA TTCTGGCCAC GGATTCGAGC ATCGAGTTCG TGGGTGTCTA TCCGGCCGTG
ATCAGCGATG GCGGTCTGGT CGGCGTGCAG GGCAAGAAGT TCTGCGAACT GATGCGCCGT
CTCCCCCCCG GCGAAATCAC CTTGAAGCTC GATCCTTCCG CCAAGCATCT GCACATCGAA
CAGGGTCGCC GCAAGTACAA GCTCCCGGCC AACGAGTCCT CCTGGTTCCA GGATTTCAAC
CCGTTTCCGG CTCAGAACGC CGTGCTCTGG TCCGGTGATC TCTTCAAGGA GATCATCGAC
CGCATCGCTT TTTGCATCGC CGACGACGAG GACCTGACCA GCATGAACTG CATCAAGTTC
GCGCCCGTCG AGAACGACGA CGTGGAGATC TGCGGTTTGA ACGGCCATCA GTTCGGCCTG
CTGCGCTTCT CCAACCCCGA TATCCGCGCG GTCCTTGGCC AGGACGGGTT TCTTGTCTCC
AAGAAGTACC TGCTCGAAAT CCGCAAATGG CTGACCAACG ACGAGATCGA GATCAGCCTT
TCGGACAAGC GGCTCTTCCT GCGCACCGAG AACCGCAAGG AATCGTTCAG CCTGCCGCTT
AAAGCCTATG TTTTTGCCGA TTACCGCAAC TTCATCAACC AGTACAAGGA CCGCTTCGCT
TCCAACCTAG TGGTGGACCG GCACGAGCTG ACCGACGCCC TGGACCGCAT CTTCGTTTTC
AACACCGAAG CCAACAAGGC CACGTTCTTC GACTTCGGCC CCGAGGAACT GTCCCTTTAC
TGCCAGGGCC AGGACATCGG CGAAGGCACG GAGCTGATCA GCTGCCAGTA TCAGGGCGAA
CTGTCCAAGA TCGCCCTGCC GACCAAGGTC ATCCTTGAGA TCCTGGGGCA CTTCGTGTCC
GACTCCCTGA CCTTTTCTTT CGTGGGACCG TCCGAACCCT GCCGCATCAC CGGCAAGGAC
GACCCCAACT ACATGATCAT CACCATGCCT GTGGAGATCA CTGAAGACAC CTATTACAGC
GAGGAAGAGC TGTAA
 
Protein sequence
MFLKVRKEEV IDGLLKASNI IPSKTGAAYL RTVWLKAEGD TISILATDSS IEFVGVYPAV 
ISDGGLVGVQ GKKFCELMRR LPPGEITLKL DPSAKHLHIE QGRRKYKLPA NESSWFQDFN
PFPAQNAVLW SGDLFKEIID RIAFCIADDE DLTSMNCIKF APVENDDVEI CGLNGHQFGL
LRFSNPDIRA VLGQDGFLVS KKYLLEIRKW LTNDEIEISL SDKRLFLRTE NRKESFSLPL
KAYVFADYRN FINQYKDRFA SNLVVDRHEL TDALDRIFVF NTEANKATFF DFGPEELSLY
CQGQDIGEGT ELISCQYQGE LSKIALPTKV ILEILGHFVS DSLTFSFVGP SEPCRITGKD
DPNYMIITMP VEITEDTYYS EEEL