Gene Dbac_3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3084 
Symbol 
ID8378779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3490547 
End bp3491041 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID645002319 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_003159575 
Protein GI256830847 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCCTT TAGTCGGAGT TATCATGGGG TCTTCCTCGG ACTGGGAGAC GATGCAGCAC 
TGTTCCCGGG CGCTGGAAAT CCTGATGGTC CCTCATGAGA CGCGGGTGGT TTCGGCGCAC
AGGACTCCGG ACCTGCTTTT TGAATACGCT GCCGGAGCCG AGGCCCGCGG CCTGCGGGTC
ATCGTTGCCG GAGCCGGAGG AGCGGCCCAC CTGCCGGGCA TGGCTGCGGC GATGACATTG
CTCCCGGTCA TTGGGGTGCC TGTCCGGTCC AAGGCCTTAA GCGGCATGGA CTCCCTGCTT
TCCATCGCCC AGATGCCGGC AGGGGTGCCG GTGGGAACCA TGGCCATCGG AAGAGCCGGA
GCCGTCAATG CCGCGCTGCT GTCAGCAGCC ATCCTCAGCG CACAGCATCC CGAAATCCGG
GAGGCGCTGG CGGAGTACCG GCGCAAGCAG ACGCAGAACG TGCTGGACAA TCCCCTGCCG
GGAGAGCCGC AATGA
 
Protein sequence
MVPLVGVIMG SSSDWETMQH CSRALEILMV PHETRVVSAH RTPDLLFEYA AGAEARGLRV 
IVAGAGGAAH LPGMAAAMTL LPVIGVPVRS KALSGMDSLL SIAQMPAGVP VGTMAIGRAG
AVNAALLSAA ILSAQHPEIR EALAEYRRKQ TQNVLDNPLP GEPQ