| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2983 |
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| Symbol | |
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| ID | 8378677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3372940 |
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| End bp | 3375858 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645002217 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003159474 |
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| Protein GI | 256830746 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGG CCTCTGTTGC CGAGTTGCTG GCCAAGGTGG AGGCTACCCC TTGGTTGGCC
GTGGATATCG CCGGGCGTCG TTTTTTTCCG CCGCAGGCTC CGCGATTTGC CGTCCCCGAG
CGGCCCTGGC CGGCCCCGGT GCAGCGCGGC CTCGATTTGC TGGGCGTGCG GGAACTCTAC
GAGCATCAGG TCCGGGCCGT TGATCTGATC CGCGCGGGCA GCCATGTGGT TGTGGCTACG
CCCACGGCCA GCGGCAAGTC CCTCATTTAC AATCTGCCCG TCCTTGAAGC CTGCCACGCC
GACCGCCGGA CCCGCGCCCT GTATCTCTTT CCCTTGAAGG CCCTGGCCCA GGATCAGCGC
CGGGCCCTGG ACTCCCTGGC CGCAAGTATC TTTCCCACGC CCACGTCGGC CATCTACGAC
GGGGACACCA CGGCCTCGCA GCGCTTACGC ATTCGCAAAA ATCCGCCAAA CGTCCTCTTC
ACCAACCCGG ACATGCTCCA TCTGGGGATT CTGCCCAGCC ATGAAAAATG GTCGGAATTT
TTCGCCAACC TGAAGTTCGT GGTCGTGGAC GAAGTGCACA CCTATCGCGG CGTCATGGGC
TCGCACATGG CCTGGGTTTT TCGCCGTCTG ATCCGCCTGT GCCGTTTGTA CGGCGCGAAC
CCGACCTTTG TCTGCTCTTC GGCGACCATC GCCAACCCCG AGGAGCTGGC TTCCGCCCTG
ACCGGATTGT CCATGAGCGC GGTGCTTGAG GGCACGGCCG CCAGTCCACC GAAACACATG
CTGCTTATAA ACGGCGTGGA TGGAGCCGCC CGCAAGGCCA TTGGCCTGTT GCAAGAGTCC
ATGGCACTGG GTTTGCGGAC TATTGTCTAT TGCAAATCAC GGCGAATGAC CGAGCTTATC
GCCTTGTGGG CGGGCGAGCG TGATGGTCCG GAAAAGGATC GCATCTGTGC CTACCGGGCC
GGTTTTTTGC CGGAGGAGCG GCGCGAGATC GAGGCCCGCC TTTCATGCGG AGAGCTGCTG
GCCGTGGTTT CCACCAGCGC CCTGGAGCTT GGCATCGACA TCGGCGGGCT CGATGTGTGC
ATTCTGGTCG GTTACCCCGG CTCCATCATG GCCAGCCTGC AGCGGTCGGG CCGGGTGGGG
CGCGGCGGAC GCGAGGCCGC GACCTTCCTG ATCGGACACG AGGATGCCCT CGATCAGTAT
TTCATGCATC ATCCCGATGA GTTTTTTGCG CTCAAGCCCG AACCGGCGGT CATCAATCCG
GACAATCCGG TCATCGCCGG CAGGCACCTG CAGTGCGCGG CGGCAGAGGC CTCGCTGTAC
GCGGACGATC CATTGGTCGG CGAAAATCCG GGACTCATCG CGGAGCTGGT GCGCGACGGA
CAAGTCCTGC AGAGCCGAGA CGGGCTGGAG TTCTTTTCCA AGGTCAGACA GCCTCATCGC
GGCGTGGCCC TGCGCGGCAC GGGTTCGACC GTGGTCATCA TGGACATGGA CAGCGGCGAG
CGCATCGGAT TGGTGGATGG TTTTCGCGCG GTGCTTGAAA CCCATCCGGG GGCGGTCTAT
CTGCACCGGG GCGTGACCTA CGTGGTCGTC GATCTGGACC TTCAGACCGG GATGGCGAAG
GCGCGGCGGG CCAAGGTCTC CTACTACACC CGCGTACGGC ACGAGAAGAG CACGGAGATC
GTGGAGGTGA GCGCCTCCCG GCCCGTGTTC GGAGCCATGG TCAGCCTCGG GCGGCTTAAG
GTCACGGACC AGGTCACGGG GTACGACCGC ATCAGCACGC GCGGCGGCCG GAACCTGGGC
ACGGTGCCCC TTGATATGGA GCCCCTAGTC TTTGAGACCA GGGGGGTCTG GATCGCCATT
CCGGAGTCCG TGAGGCGGTC GGTCGAAGCA GAGATGGCGC ATTTCATGGG GGGCATCCAT
GCCCTGGAGC ATGCGGCCAT CGGCATGATG CCCCTTTTGG TCATGACGGA CAGGAACGAC
CTGGGCGGAA TCTCCATTCC GTTCCATCCC CAGGTCGGGT CCGCGGCCGT GTTCATTTAC
GACGGGTTGC CCGGCGGATG CGGGCTGGCC GAGCAGGCCT ACGCCGAATA CGAGACATTG
CTGGAGCGCG CCATGGGCGT GATCCGGCAA TGTGCGTGCG AGAACGGGTG TCCGGCCTGC
GTGCATTCGC CCAAATGCGG CTCCGGCAAC AGGCCCATCG CCAAGGGCGC GGCCTTGCTG
GTGCTGGAGG GAGTGATGAC CGGGGCCGCG CCTGAGACGT ATGGGGAAAT GCCTCCGGCG
GCCGGGGGGC ATGATGCCCC CCGGACCCCT CCGGCGGGGT TGGGAAATGA AGCCGTCGGG
GATGCGCGTG CGCAGGGGGC TGGGCTGCCG GAGGGGTTTC GGTTTGCGGT GCTGGATCTG
GAGACACGGC GTTCGGCCCA GGAGGTGGGC GGTTGGCACC GGGCCGACCT GATGGGGGTG
AGTTGCGTGG TGGTCTATGA CTCAGCCAGC GGGGATTTTC GTGACTACCT GCAGGAGGAC
GTGCCGCGTT TGGTCGGGGA CCTGGTGGAG TTCGACATGG TGGTGGGTTT CAATATTCTC
AAGTTCGACT ACGCGGTGCT CGGCGGCTTG AGCCGTTTTG ACTTTGCGAG CCTGCCCACC
CTGGATATCC TGGGCAGCAT CCACGAGACC CTGGGCTATC GACTGTCCCT GGACCATCTG
GCCCGCGAGA CGCTGGGCGA AGCCAAGAGC GCAAGCGGCA TGCAGGCCCT TGCCTGGTGG
AAACAGGGGC GCATCGCCGA CATCATCGCC TATTGCCGCC AGGATGTGGC CGTGACTCGC
GACCTTTTTC TTTACGGCCT GCGGCATGGG CATCTCATTT TCCGCAACAA GGCGGAAAAG
ACCGTGCGCC TGCCCGTGGA CTGGCGTCCC AAAAAGTAG
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| Protein sequence | MSEASVAELL AKVEATPWLA VDIAGRRFFP PQAPRFAVPE RPWPAPVQRG LDLLGVRELY
EHQVRAVDLI RAGSHVVVAT PTASGKSLIY NLPVLEACHA DRRTRALYLF PLKALAQDQR
RALDSLAASI FPTPTSAIYD GDTTASQRLR IRKNPPNVLF TNPDMLHLGI LPSHEKWSEF
FANLKFVVVD EVHTYRGVMG SHMAWVFRRL IRLCRLYGAN PTFVCSSATI ANPEELASAL
TGLSMSAVLE GTAASPPKHM LLINGVDGAA RKAIGLLQES MALGLRTIVY CKSRRMTELI
ALWAGERDGP EKDRICAYRA GFLPEERREI EARLSCGELL AVVSTSALEL GIDIGGLDVC
ILVGYPGSIM ASLQRSGRVG RGGREAATFL IGHEDALDQY FMHHPDEFFA LKPEPAVINP
DNPVIAGRHL QCAAAEASLY ADDPLVGENP GLIAELVRDG QVLQSRDGLE FFSKVRQPHR
GVALRGTGST VVIMDMDSGE RIGLVDGFRA VLETHPGAVY LHRGVTYVVV DLDLQTGMAK
ARRAKVSYYT RVRHEKSTEI VEVSASRPVF GAMVSLGRLK VTDQVTGYDR ISTRGGRNLG
TVPLDMEPLV FETRGVWIAI PESVRRSVEA EMAHFMGGIH ALEHAAIGMM PLLVMTDRND
LGGISIPFHP QVGSAAVFIY DGLPGGCGLA EQAYAEYETL LERAMGVIRQ CACENGCPAC
VHSPKCGSGN RPIAKGAALL VLEGVMTGAA PETYGEMPPA AGGHDAPRTP PAGLGNEAVG
DARAQGAGLP EGFRFAVLDL ETRRSAQEVG GWHRADLMGV SCVVVYDSAS GDFRDYLQED
VPRLVGDLVE FDMVVGFNIL KFDYAVLGGL SRFDFASLPT LDILGSIHET LGYRLSLDHL
ARETLGEAKS ASGMQALAWW KQGRIADIIA YCRQDVAVTR DLFLYGLRHG HLIFRNKAEK
TVRLPVDWRP KK
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