| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2963 |
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| Symbol | rpsA |
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| ID | 8378656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3351383 |
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| End bp | 3353164 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645002196 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_003159454 |
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| Protein GI | 256830726 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000174303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA CTCAAACCAC GCCAGAGTCC ATGAATGATT TCGACATGGA GATGGATTTT
GAGTCTCAAC TCGAGAACTA TCTCAACTCC GATTTCGGTG ACATCGAAGA GGGAGTGATC
GTTTCGGGCG AGGTCGTGAA GATTGATGAC AGCTACATTC TCGTGGATGT CAATTTCAAG
TCCGAAGGTC AGATTCCACT CGATGAGTTC ATGGAAAACG GCCAGGTGAC TGTCAAAGTT
GGCGACACTG TCGACGTATA TGTTGTCCGC AAAAATGAGC GCGAAGGCTC CATCGTCCTG
TCCAGGGAAA AAGCCAAGCG CATGCAGGTC CTGGACGAAC TGGAAAAACT GCTCGACTCC
GGCGATGTCG TGGTCGGCCG CATCGTGCGC CGCATCAAGG GCGGCTATGT TGTTGAAATC
AAGGGAATCG AGGCCTTCCT GCCCGGCTCC CATGTCGATC TGCGTCCGGT TCCGGACATG
GATGCCCTGG TCAACCAGGA TTTCGAATTT CGCGTGCTGA AGATCAATCG CCGTCGCAGC
AACGTTATTG TTTCCCGTCG CGTGCTCCTT GAAGAAGATC GCGACCGCAA GCGCGGCGAA
TTGCTGACCA CCCTCGAAGA GGGTCAGTCC GTAGTCGGCG TGGTCAAGAA CATCACCGAA
TACGGCGTGT TCATCGACCT CGGCGGCCTC GACGGTCTGC TGCACATCAC CGACATGTCC
TGGAAGCGCA TCAAGCATCC CAAGGAAATG GTCCAGCTGG GCGACGAACT GACTCTCAAA
GTCCTGTCCT TCGACAAGGA CGAGAAGAAG GTATCCCTCG GCCTCAAGCA GCTGGTCATG
GATCCCTGGG CCAACATCTC CGAGAAATAC CCCGAAGGGC ACAAGCTTTC CGGCAAGGTC
ACCAATCTGG TGGACTACGG CGCGTTCGTG GAACTGGAAG CCGGCGTTGA AGGCCTGGTG
CACATCTCCG AGATGTCCTG GACCCGCAAG CTGCGTCATC CTTCCCAGAT GGTGCGCCCC
GGCGACGAAG TGGATGTCAT CATCCTCGGC GTGGACGTGG ACCGCAAGCG CATCTCGCTC
GGCATGAAGC AGGTCGCTCC CAATCCCTGG GACCTGGTCG CCGAGAAGTA TCCTGAAGGC
ACCATCCTTG AAGCCAGCGT CAAGAACATC ACCGAATTCG GCCTGTTCAT CGGCATCGAG
GACGGCATCG ACGGTCTCAT TCACGTTTCC GACCTGTCCT GGACCAAGAA GATCCGTCAC
CCCAATGAGC TCTACAAGGT GGGCGACGTT GTCCGCGCCA AGGTTCTGAC CGTGGACAAG
GAGAACGAGA AGTTCACCCT GGGCATCAAG CAGCTGGCCG ACGACCCGTG GCTGGACGTG
CCCAATCGCT ACCCCGTGGG CACCATGCTG ACCGGCACCA TCACCAACAT CACGGATTTC
GGTCTGTTTG TTGAGGTTGA GGAAGGCATC GAAGGTCTGG TCCACGTCAG CGAGATGAGC
AAGAAGAAGA TCAAAAGCCC CAAGGAAGCC TTCAACGAAG GTGACGCCAT CGAGGCCAAG
GTCATTCACG TCAGCGCCGA CGAGCGCCGC CTGGGACTCT CTCTCAAGGC TCAGGAGCCT
GAGCGCAAGC GCACCGGCGG TGCCGGTGAA TTCCGCACCA CGCAGAGCGG TTCCATGACC
GGCAGCAACC TCGGCGATAT GATCCGTCAG AAGATGGAAG AGAATGCCGA GACCGGAGTC
GAAGCCGACA CCGAGACCGA CGCCGAGACC GAAGAAGAAT AG
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| Protein sequence | MNNTQTTPES MNDFDMEMDF ESQLENYLNS DFGDIEEGVI VSGEVVKIDD SYILVDVNFK
SEGQIPLDEF MENGQVTVKV GDTVDVYVVR KNEREGSIVL SREKAKRMQV LDELEKLLDS
GDVVVGRIVR RIKGGYVVEI KGIEAFLPGS HVDLRPVPDM DALVNQDFEF RVLKINRRRS
NVIVSRRVLL EEDRDRKRGE LLTTLEEGQS VVGVVKNITE YGVFIDLGGL DGLLHITDMS
WKRIKHPKEM VQLGDELTLK VLSFDKDEKK VSLGLKQLVM DPWANISEKY PEGHKLSGKV
TNLVDYGAFV ELEAGVEGLV HISEMSWTRK LRHPSQMVRP GDEVDVIILG VDVDRKRISL
GMKQVAPNPW DLVAEKYPEG TILEASVKNI TEFGLFIGIE DGIDGLIHVS DLSWTKKIRH
PNELYKVGDV VRAKVLTVDK ENEKFTLGIK QLADDPWLDV PNRYPVGTML TGTITNITDF
GLFVEVEEGI EGLVHVSEMS KKKIKSPKEA FNEGDAIEAK VIHVSADERR LGLSLKAQEP
ERKRTGGAGE FRTTQSGSMT GSNLGDMIRQ KMEENAETGV EADTETDAET EEE
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