Gene Dbac_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2942 
Symbol 
ID8378635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3328373 
End bp3329728 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content65% 
IMG OID645002175 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003159433 
Protein GI256830705 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAT CCAAAATTAC CATCCTCATC GTTGACGATG ACTCCGGTCA CCGGGGCATG 
CTGCGCACTC TGTTGGCCGA TTGGGGCTTC GTCCCGCATG AGATCGAGAG TGGAGAGGCG
GCCGTGTCCC TGTGCCGGGA GCGGGCCTTC GACCTCATCC TCATGGACGT GCGCATGGCC
GGGATTTCCG GCATCGAAGC ACTCAAGGAG ATCAAGGCCT ACAATCCGGC CATCCCCATC
CTGATCATGA CCGCTTATTC CAATGTGGAA ACAGCGGTGG AGGCCATCAA GGCCGGGGCC
TACGACTACC TGACCAAACC CCTGGACTTC GACGACCTGC GCCTGACCCT GGATCGGGCC
CTGGACCATG CGGCCCTGCG CGACGAAAAC AAGGCCCTGC GCCAGACCCT GTCCGCGTCC
TTCGATTCCG GCGGGATCAT CGGCCAGAGT CCGGCCATGC ACCGGCTCAT GGACATGCTG
GCCACCATCG CCCCATCCGA GGCCACGATC ATGGTCACTG GCGAGTCGGG CACGGGCAAG
GAGCTCATCG CCAGGGCCGT CCACGCCAAC AGCCCTCGCC GCAAGGGACC CTACGTCGCC
GTGAACTGCG CGGCCCTGAC CGAAACCCTG CTCGAATCCG AGCTCTTCGG CCACGAGAAG
GGCGCCTTCA CCGGAGCCGA CCGGAGGCGG GAGGGGCGCT TTCTGGCGGC GGACAAGGGG
ACCATCTTTC TGGACGAGAT CGGGGAGATG CCCCTGTCCA TGCAGGTCAA GCTTTTGCGC
GTCATTCAGG AGCGCGAAAT TCAGCGCGTG GGCGGGGACC AGACCATCAA GGTCGATGTG
CGCATCGTGG CCGCCACCAA CCGCGACCTC CTGGCCGAGG TGGAGGCGGG GCGCTTTCGC
CAGGATCTCT ACTACCGCCT GAACGTGGTC GCCCTGGCCC TGCCCCCGCT GCGCGAACGG
GAGGAGGATA TTCCGCTCCT GGCCTCGCAC TTTCTGACCG GGTTTGCCGT CAAGAACGGC
AAGCGCATCA AGGGTTTTAC CCCCGAGGCC ATGGACCGCC TGCTCAAACA TCAGTGGCCC
GGCAACGTGC GGGAGCTGGA GAACGCCGTG GAGCGGGCCG TGGTCCTGGC CCGGGGCGAA
TACGTCAGCG AGCGCGAGCT GCCGCCCGCA TTGTCCGGCG GCGCGGGGGA GGGCAGACCG
GAGGGCGGAT TCGCCAACCT GACCCTTGAG GAGTTGGAGC GCCTGGCCAT CCTCGACGCA
TTGGAAGCGG CCGGCGGAAA CAAGAGCGAG GCCGCCCGCC GCCTGGGCAT CACCAGAAAG
ACCATGCACG CCAAATTGGC CAAGTACGGA GAGTGA
 
Protein sequence
MKPSKITILI VDDDSGHRGM LRTLLADWGF VPHEIESGEA AVSLCRERAF DLILMDVRMA 
GISGIEALKE IKAYNPAIPI LIMTAYSNVE TAVEAIKAGA YDYLTKPLDF DDLRLTLDRA
LDHAALRDEN KALRQTLSAS FDSGGIIGQS PAMHRLMDML ATIAPSEATI MVTGESGTGK
ELIARAVHAN SPRRKGPYVA VNCAALTETL LESELFGHEK GAFTGADRRR EGRFLAADKG
TIFLDEIGEM PLSMQVKLLR VIQEREIQRV GGDQTIKVDV RIVAATNRDL LAEVEAGRFR
QDLYYRLNVV ALALPPLRER EEDIPLLASH FLTGFAVKNG KRIKGFTPEA MDRLLKHQWP
GNVRELENAV ERAVVLARGE YVSERELPPA LSGGAGEGRP EGGFANLTLE ELERLAILDA
LEAAGGNKSE AARRLGITRK TMHAKLAKYG E