Gene Dbac_2841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2841 
Symbol 
ID8378532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3220313 
End bp3221317 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID645002072 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_003159332 
Protein GI256830604 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.671161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA GAGAAAAACG AAGATTGAAA GTCGTGTTCA TGGGCACGCC GGATTTTGCG 
GCCGTGTCCC TAAGGCACCT TCTGGACTGG GGCGGCTGCG ACGTCGTTGG AGTCTATTGC 
CAGCCTGACC GGCCCTGCGG CCGGGGGCAG GTCTGCACGC CGCCACCCGT CAAGCTGCTG 
GCCATGGAGG CGCGGCTGCC CGTGTTCCAG CCCCTGAACT TCAAGGAGCA GGCGGATGTG 
GACCAGCTCG CGGCCCTTGA ACCGGACCTA CTGCTCGTCG CGGCCTACGG GCTGATCCTC 
CCCCAGTCGG TACTGGACAT TCCCAGGCTT GGCGCCTTCA ACGTGCATGC CTCGCTTCTG 
CCCGAGTACC GTGGTGCTGC CCCCATTCAG CGCGCCATCA TGGACGGACG CCCCGTGACC 
GGCATCACCA TCATGCACAT GGAGGCGGGC CTGGACACCG GCGACATCCT GCTGCAGCGC 
AGCCGCGCCA TCGGCATCAT GGACACGGCC CAGACTCTGC ACGACGAACT GGCCGAGATG 
GGCGGCAAGC TCCTGGTCGA CGCCCTGGAA AAAATGGGCC AGGGACGCCT TGTGCGCATC 
CCTCAGGACC ACGCCCGGGC CACCTATGCC GCGAAGCTTT CCAAAGAAGA AGGGCGCATC 
GATTGGAACC AGCCCGTCCT GACCGTGCAC AACCGCATCC GCGGCCTCTT CCCCTGGCCC 
GGTTCCTGGT TCGATTGGGA CGGCATGCCC GGCAAGACCC TGCGTCTGAC CGTACACCCC 
GGCACCATCG GCGACCCCCT GCCCGAAGGA GCGCAGCCCG GCGAAATCCA CGGCGTGGCC 
GATGAAAACG TGCTCATCGC CTGCGCTGAT CGCCTGTACG CAGTGCCGGT CATCAAGCCC 
GCAAACAGCA AACCCCTGCG CGGCCGCGAG TTTTACTGCG GCTATCTGAG CCGCTGCTCC 
GGCGACCACC TGCTCAAACC CGAACCTGCC TGCCCGGGCG AATAA
 
Protein sequence
MAEREKRRLK VVFMGTPDFA AVSLRHLLDW GGCDVVGVYC QPDRPCGRGQ VCTPPPVKLL 
AMEARLPVFQ PLNFKEQADV DQLAALEPDL LLVAAYGLIL PQSVLDIPRL GAFNVHASLL 
PEYRGAAPIQ RAIMDGRPVT GITIMHMEAG LDTGDILLQR SRAIGIMDTA QTLHDELAEM 
GGKLLVDALE KMGQGRLVRI PQDHARATYA AKLSKEEGRI DWNQPVLTVH NRIRGLFPWP 
GSWFDWDGMP GKTLRLTVHP GTIGDPLPEG AQPGEIHGVA DENVLIACAD RLYAVPVIKP 
ANSKPLRGRE FYCGYLSRCS GDHLLKPEPA CPGE