Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2824 |
Symbol | |
ID | 8378515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 3202013 |
End bp | 3202966 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645002055 |
Product | Substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_003159315 |
Protein GI | 256830587 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCATTG CAACACTGAA AAAAACCATC CCCGTCCTTG TCCTTCTACT CGCCCTCTTC ATCGCTCCGG CTCAGGCCAG CCGCGACGAC GTGCGCATCA CCAGCGTCGG GTGGACCGAT GTCACCGTGA CCAGCGAGCT GGCCGTGGCC ATTTTGCAGA GCCTTGGCTA CTCCTCCTCC AACATGATGA CCTCCCTGCC CATCTGCTAT CAGGCCCTGG CCACGAACGA GGCCGACGTG TTCCTCGGCA ACTGGATGCC GTCCATGGAA AGCGTAGCGC GTCCCCATTT CGATTCCGGC AACGTCATCC AGCTTGTGCC GAACATGACC GGAGCCAAAT ACACCCTGGC CGTGCCGAGC TACGTGGCCG CAGGCGGCCT CAAGGATTTC AAGGACATCG CCAAGTACGG CGACAAGCTG GAATGGAAGA TCTACGGCAT CGAGGAAGGT AACGACGGCA ATGACATCAT CGAATCCATG ATCGACAAGA ACATGTTCGG CCTCGGCAAG TTCGAGCTGG TCGCCTCCAG CGAATCCGGC ATGCTGGCCC AGGTGCAATC CTTCATGCGT GAAAAGAAAT GGATCGTCTT TCTGGGATGG TCCCCGCACA GCATGAACGA AAAGATCGAC ATGACGTACC TGACGGGCAG CACGGACGAC ACCTTCGGAC CGAACGACGG CACGGCCACG GTCTACACCA ACGTGCGCAA GGGACTGCCG CAGGACATGC CCAACGTAAC CCGTTTTCTG CAGAACTACG TCGTGCCCGT AACCATGATG AACTCCATCA TGGTCACCAT GCACGAAAAG CCTGAAATGA AAGCCCGCGA TGCGGCCCTG GACTGGGTGA CCGCGCATCC GGACATGGCC GCCACATGGC TTGAAAGCGT GACCACCAAG GAAGGCAAGC CCGGCCTGCC CGCCTTCCTG AAGCTGCTTG AATCCCGCAA GTAA
|
Protein sequence | MTIATLKKTI PVLVLLLALF IAPAQASRDD VRITSVGWTD VTVTSELAVA ILQSLGYSSS NMMTSLPICY QALATNEADV FLGNWMPSME SVARPHFDSG NVIQLVPNMT GAKYTLAVPS YVAAGGLKDF KDIAKYGDKL EWKIYGIEEG NDGNDIIESM IDKNMFGLGK FELVASSESG MLAQVQSFMR EKKWIVFLGW SPHSMNEKID MTYLTGSTDD TFGPNDGTAT VYTNVRKGLP QDMPNVTRFL QNYVVPVTMM NSIMVTMHEK PEMKARDAAL DWVTAHPDMA ATWLESVTTK EGKPGLPAFL KLLESRK
|
| |