Gene Dbac_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2788 
Symbol 
ID8378473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3168259 
End bp3169452 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content57% 
IMG OID645002014 
Producttranslation elongation factor Tu 
Protein accessionYP_003159280 
Protein GI256830552 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.117991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGC AAAAATTTGA AAGAAAAAAG CCGCACGTCA ATATCGGTAC GATTGGTCAT 
ATCGACCACG GCAAGACGAC GTTGACCGCC GCAATCACGA AGATTGCGAG CCTCAAGGGC
GGCGGATCCT TTGTAGCGTT CGATGAGATC GACAAGGCTC CTGAAGAGAA GGAACGCGGT
ATCACCATTG CAACCGCGCA CGTCGAGTAC GAGACCGCCA ATCGTCACTA TGCCCACGTG
GATTGCCCCG GTCACGCCGA CTACATCAAG AACATGATCA CCGGCGCGGC CCAGATGGAC
GGCGCGATCA TCGTTGTTGC GGCCACCGAC GGTCCCATGC CCCAGACTCG TGAGCACATC
CTGCTCGCCC GTCAGGTTGG CGTTCCTTAT GTCGTGGTGT TCCTGAACAA GGTCGACCTT
GTTGACGATG AAGAATTGAT CGAACTGGTA GACATGGAAG TGCGCGAACT GCTGTCCAAG
TACGAGTTCC CCGGCGACGA CGTTCCGGTC ATCCGCGGTT CCGCCTTGAA GGCGCTGGAA
AGCGACACTG CCGACAGCGA AGACGCCAAG TGCATTCTTG AGCTGTTGGA CGCTTGCGAC
TCTTACATTC CCGCTCCGAT TCGCGAGACC GATAAGCCCT TCCTGATGCC TATCGAAGAC
GTGTTCTCCA TTTCCGGTCG CGGCACTGTC GTCACCGGTC GTGTCGAGCG CGGCATCGTG
CGCGTTGGCG AGGAAGTCGA GATCGTCGGT ATCACCGATA CCCGCAAGAC GACCTGCACC
GGCGTTGAAA TGTTCCGCAA GCTTCTTGAC GAAGGTCAGG CCGGCGACAA CATCGGCGCC
CTGCTTCGCG GCGTGAAGCG TGACGATGTT GAGCGCGGCC AGGTACTTGC CAAGCCGGGC
AGCATCACCC CGCACACGAA GTTCTCTGCG GAAGTGTACG TCCTGAGCAA GGAAGAAGGC
GGTCGTCATA CACCTTTCTT CTCCGGCTAT CGTCCTCAGT TCTATTTCCG TACGACAGAC
ATCACCGGTG TGGTGACTCT GGATGAAGGC ATAGAAATGA TCATGCCTGG TGACAACACG
ACTTTCCATG TGCATCTGAT CAATCCGATC GCCATGGAAA AGGGTCTTCG CTTCGCAATC
CGCGAAGGTG GACGTACCGT TGGCGCTGGT GTTGTTTCCG AAATCGTGGA GTAA
 
Protein sequence
MAKQKFERKK PHVNIGTIGH IDHGKTTLTA AITKIASLKG GGSFVAFDEI DKAPEEKERG 
ITIATAHVEY ETANRHYAHV DCPGHADYIK NMITGAAQMD GAIIVVAATD GPMPQTREHI
LLARQVGVPY VVVFLNKVDL VDDEELIELV DMEVRELLSK YEFPGDDVPV IRGSALKALE
SDTADSEDAK CILELLDACD SYIPAPIRET DKPFLMPIED VFSISGRGTV VTGRVERGIV
RVGEEVEIVG ITDTRKTTCT GVEMFRKLLD EGQAGDNIGA LLRGVKRDDV ERGQVLAKPG
SITPHTKFSA EVYVLSKEEG GRHTPFFSGY RPQFYFRTTD ITGVVTLDEG IEMIMPGDNT
TFHVHLINPI AMEKGLRFAI REGGRTVGAG VVSEIVE