| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2781 |
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| Symbol | rpoB |
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| ID | 8378465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3160678 |
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| End bp | 3164769 |
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| Gene Length | 4092 bp |
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| Protein Length | 1363 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645002006 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_003159273 |
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| Protein GI | 256830545 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC TGATCAAGAA ATTCGGACGA ATTAAAGATT CCATTGATAT CCCTCATCTT
TTAAGCCTTC AGCTTGATTC GTATAATAAA TTTCTGCAGA CTGATGTTCC GCCCAGCATG
CGCACGGATA TCGGTCTCGA AGGCGTTTTT CGTTCTGTTT TTCCGATTCA TGATTTCAAT
AAGACGGCCA CCTTGGAATA CGTCAGTTAC GATATCGGCA AGCCCAAATA CGATGTCGAT
GAGTGCATCG CCAAGGGTTT AACCTTTGAA GCTCCCTTGC GCATCAAGGT GCGTCTCGCC
GTGTACGACG TCGATGAGGC GTCCGGCAGT CGCACCATCC ATGACATCAA GGAGCAAGAC
ATATATTTCG GAACGATCCC GCTCATTACC CAGAAGGGAA CGTTTTTGAT CAATGGCACC
GAGCGTGTCA TTGTTAACCA GCTGCAGCGA TCGCCCGGCA TCATCTTTGA GCACGATTCC
GGCAAGACGC ATTCAAGCCG TAAAATCCTG TACAGCTGCC GCATAATTCC CATGCGCGGG
TCCTGGCTGG ATTTTGATTT CGACCACAAA GACATCCTTT ACGTGCGCAT CGACCGCCGC
CGCAAAATGC CCGCCACGAT TTTGCTCAAG GCCATGGGCA TGACCAGCGA GGATATTCTC
GACTATTACT ACGCCAAAGA GACTTTTCGC CTTGAAGGCA CCTCTGTCCT GCGGCGCGTG
GAAGAGTACA ACTTCCGCAA GGAACTGGCT CATTCCGATG TCGTCGCTCC CGACGGAACC
GTGATTGTCG CTGCCGGCAA GGCCCTGACC AAGGGCATGT GGAAGCGGAT GATCAAGGCC
GGGATCGAGT ATTACGAGGT TCGCCCCGAT ACGCTCGAGA CGGAATATGC CGCCAAGGAC
ATTGTCGACC CCGGGACCGG AGAGGTCATC CTGCGCGCAG GAGATCCCTT TACCGCCGGA
GCCGTGGAAA AATGCCTGGC TGCGGGCATC ACCGAAATGG GTGCGATATT CTCTACTGGT
GCCGAGGCCT CCGCGTGTCT GCGCGATACC CTGGCCATGG ACAAGTGCGA AGATTTGGAA
AGCGCGCAGA TCGACATCTA CAAGCGTCTG CGTCCCAGTT CTCCGCCCAC AGCCGAGATT
TCAGCCAGCT TCTTCGACAA TTTGTTCAGG AATGCCGATT ATTACGATCT CTCTCCTGTC
GGACGCTACA AGCTCAATTC CCGTTTGAAC CTGAGCCTGC CCATTGATCA CCGCACGTTG
TCCAACGACG ACATCTTCCG GTCGGTCAAG AAGCTCATTC AGCTCAAGGA CTCTCACGGT
CCCGCCGATG ACATCGATCA TCTTGGCAAC CGTCGTGTCA GGCCCGTCGG CGAGTTGGTG
GAGAATCAGT ACCGCATCGG CCTGGTGCGC ATGGAGCGCG CAATCAAGGA ACGCATGAGC
CTGCAGGAAG TCGCAACGCT GATGCCGCAC GACCTGGTCA ATCCCAAGCC GGTCACCGCC
GTGCTAAAGG AATTTTTCGG CACATCGCAG CTGTCGCAGT TCATGGACCA GACCAACCCC
TTGTCCGAGG TTACGCACAA GCGGCGTCTG TCCGCTCTCG GACCCGGCGG CCTGACTCGT
GAACGTGCAG GGTTCGAGGT GCGCGACGTT CATCTTAGCC ATTACGGACG TATCTGTCCC
ATTGAAACTC CCGAAGGCCC GAACATCGGC CTTATCGTTT CTCTGACCAC GCACGGGCTG
GTCAACGATT ACGGTTTCAT CGAGACCCCG TATCGCGTGG TCAAGGATGC GATCGTCACC
GATGAAATCC AGTACATGGA AGCGTCCACC GAAAGCGGGC ACATCATCGC CCAGGCCAAT
GCTCTTTTCG GCGATGACCG TCAGTTCATC AACGCTCAGG TCGAGGCCCG GGTCGAGGGC
GAGTTCGCCA TCGTGCCACG CGAAGAAGTG ACGCTCATGG ACATTTCTCC GGGGCAGATC
GTGTCCATTT CTTCCGCGCT GATTCCCTTT CTGGAGCACG ATGACGCCAA CCGCGCGCTC
ATGGGTTCGA ACATGCAGCG TCAGTCGGTC CCGCTTCTGG TGACCGAGGA GCCGCTGATC
GGTACCGGCA TCGAGGGCAA GGTCGCCCAG GATTCCGGAA GCTGCCTTTT GGCCGAGGGT
GACGGCGAGA TCATGTACGT TGACGCGGAC CGGGTCATTG TCGCCTATTC TGACGACCTG
TACCCCGAAG CCGGCGGCGT GCGTTTTTAC GAGGTGCAGA AATACCACAA GTCCAACCAG
AACAGCTGCT TTGGCCAGAA ACCTCGGGTC AAGATCGGGG ACAAGGTCAA GAAGGGCGCG
GTCCTGGCGG ATGGCCCGGC CATCCATAAC GGAGAGCTGG CCCTGGGCAA GAACCTGCTT
GTGGCCTTCA TGCCCTGGTG TGGTTACAAC TACGAAGACT CCATCCTGAT TTCAGAGCGG
GTCGTGAAAG AAGATGTCTA CACCTCCATC CACATCGAGG AGTTCGACGT ATTCGCCCGC
GACACCAAGC TCGGACCCGA GGAAGTCACC CGCGACATTC CCAACGTCGG CGAAGAAATG
CTGCGCAATC TCGACGAGAG CGGCATTATT CGCATCGGCG CTCGGGTTAA GCCGGACGAC
ATTCTGGTCG GCAAGATCAC GCCCAAGGGC GAGACGCAGC TGACACCGGA AGAGCGGCTC
CTGCGGGCCA TCTTCGGAGA CAAGGCGCGT GACGTGAAGA ATACGTCCCT CAAGGTTCCG
CCGGGAATCG AGGGCACGGT CATCGACGTC AAGGTTTTCA ACCGCCGCTC CGGAGACAAG
GACGAGCGTA CGCACCTGAT CGAGAATTAC GAGCTTGAAC GCATCGACGT GCGTGAAAGA
CAGCACGCCG CAGCCCTGAC CGAAACCACC CGGCGCAAGA TCTGGGATGT CTGCAAGGGT
AAAAGCGTTG CCAAGACCAT CATGGGCAAG CGCAAGGGAG AAGTGCTCCT TGAGGCCAAC
CAGCCCATAA AAGAAGATGT TTTTGCTGAA ATTCCGCTCA AGAAGCTTGT CGGTGCTTTT
GCTGCCAAGG ACGTCAACGA AGCCGTGAAG GTGCAGCTCG ACTATTTCGA TCTGCAGCTC
AAATTCGTCA AGGACGTGTA TGAAAGCAAG CGCGGCAAGG TCACCGAAGG GGACGATCTG
CCTCCGGGCG TCATCAAAAT GGCGAAGGTC TATGTTGCCG TGAAGCGTAA GCTCAATGTC
GGCGATAAGA TGGCCGGTCG TCACGGCAAC AAGGGTGTTG TTTCCAACAT CCTGCCCGAA
GAGGACATGC CGTTCTTTGC TGACGGAACG TCCATGGACG TGGTTCTGAA TCCTCTGGGC
GTACCTTCGC GTATGAACAT CGGCCAGATC ATGGAGACGC ATTTGGGTTG GGCGGCAAAG
TCCCTTGGTC AGCAGATCGC GGCCATGGTC GATGAAGGCG TGGCCAAGGT GCGCAGCGAA
ATCAAGGACA TTTTCGATTC ACCCGAGACT TCGGCGTTGC TGGATACCAT GACGGATGAC
GAAGTCATTG AAGCCGCCCG GGATCTCAAT CGCGGCATAA TCATGAAGAC TCCCGTTTTT
GACGGCGCCG ACGAGAGCGA GATCTGGGCG CTGCTCAAGA GAGCAGGGCT GCCCGAAGAC
GGCAAGGCGC TGCTCTTTGA CGGTCGTACC GGCGTTCCGT TCCACAACCG TGTCACGGTG
GGCTACATGT ATTACCTGAA GCTGCACCAT CTGGTTGACG AGAAAATTCA TGCCCGCTCG
ACGGGTCCTT ACTCCCTGGT CACCCAGCAG CCCCTCGGCG GCAAGGCCCA GTTCGGCGGA
CAGCGTCTCG GTGAAATGGA AGTCTGGGCC CTGGAAGCAT ACGGCGCCGC TTATCTGCTG
CAGGAGTTTT TGACGGTCAA ATCCGATGAT GTGAACGGTC GTGTGAAGAT GTATGAAAAG
ATTGTGAAGG GATCCAATTT CCTCGAAAGC GGAATGCCCG AATCATTCAA CGTATTGGTC
AAGGAAATGA TGGCGCTGGG TCTTGAAGTC ACCCTTTTGG AAGACGACAA GAAGCGCCCG
AGGAAAAGAT GA
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| Protein sequence | MNKLIKKFGR IKDSIDIPHL LSLQLDSYNK FLQTDVPPSM RTDIGLEGVF RSVFPIHDFN
KTATLEYVSY DIGKPKYDVD ECIAKGLTFE APLRIKVRLA VYDVDEASGS RTIHDIKEQD
IYFGTIPLIT QKGTFLINGT ERVIVNQLQR SPGIIFEHDS GKTHSSRKIL YSCRIIPMRG
SWLDFDFDHK DILYVRIDRR RKMPATILLK AMGMTSEDIL DYYYAKETFR LEGTSVLRRV
EEYNFRKELA HSDVVAPDGT VIVAAGKALT KGMWKRMIKA GIEYYEVRPD TLETEYAAKD
IVDPGTGEVI LRAGDPFTAG AVEKCLAAGI TEMGAIFSTG AEASACLRDT LAMDKCEDLE
SAQIDIYKRL RPSSPPTAEI SASFFDNLFR NADYYDLSPV GRYKLNSRLN LSLPIDHRTL
SNDDIFRSVK KLIQLKDSHG PADDIDHLGN RRVRPVGELV ENQYRIGLVR MERAIKERMS
LQEVATLMPH DLVNPKPVTA VLKEFFGTSQ LSQFMDQTNP LSEVTHKRRL SALGPGGLTR
ERAGFEVRDV HLSHYGRICP IETPEGPNIG LIVSLTTHGL VNDYGFIETP YRVVKDAIVT
DEIQYMEAST ESGHIIAQAN ALFGDDRQFI NAQVEARVEG EFAIVPREEV TLMDISPGQI
VSISSALIPF LEHDDANRAL MGSNMQRQSV PLLVTEEPLI GTGIEGKVAQ DSGSCLLAEG
DGEIMYVDAD RVIVAYSDDL YPEAGGVRFY EVQKYHKSNQ NSCFGQKPRV KIGDKVKKGA
VLADGPAIHN GELALGKNLL VAFMPWCGYN YEDSILISER VVKEDVYTSI HIEEFDVFAR
DTKLGPEEVT RDIPNVGEEM LRNLDESGII RIGARVKPDD ILVGKITPKG ETQLTPEERL
LRAIFGDKAR DVKNTSLKVP PGIEGTVIDV KVFNRRSGDK DERTHLIENY ELERIDVRER
QHAAALTETT RRKIWDVCKG KSVAKTIMGK RKGEVLLEAN QPIKEDVFAE IPLKKLVGAF
AAKDVNEAVK VQLDYFDLQL KFVKDVYESK RGKVTEGDDL PPGVIKMAKV YVAVKRKLNV
GDKMAGRHGN KGVVSNILPE EDMPFFADGT SMDVVLNPLG VPSRMNIGQI METHLGWAAK
SLGQQIAAMV DEGVAKVRSE IKDIFDSPET SALLDTMTDD EVIEAARDLN RGIIMKTPVF
DGADESEIWA LLKRAGLPED GKALLFDGRT GVPFHNRVTV GYMYYLKLHH LVDEKIHARS
TGPYSLVTQQ PLGGKAQFGG QRLGEMEVWA LEAYGAAYLL QEFLTVKSDD VNGRVKMYEK
IVKGSNFLES GMPESFNVLV KEMMALGLEV TLLEDDKKRP RKR
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