| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2771 |
|---|
| Symbol | rplB |
|---|
| ID | 8378455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3149444 |
|---|
| End bp | 3150274 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645001996 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_003159263 |
|---|
| Protein GI | 256830535 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00347741 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTC GAAAGCTTAA ACCCACATCT GCCGGACGCA GGTCGCAGAC TGTTCTCACG
TTTGATGAGA TCACTTGCAC AACTCCTGAA AAGTCCCTGA CCAAGGGTTT GAATAAAAAA
AGCGGCCGCA ACAATAACGG TCGTGTCACC ATGCGCCGCC GTGGCGGTGG AAACAAGTCT
TTGTATCGCC TGATTGATTT TAAGCGGAAC AAAATTGACG TCCCGGCAAA GGTCGCCACT
ATCGAGTACG ATCCGAACAG AAGCGCCCGT ATCGCCTTGC TGCATTATGC TGACGGCGAG
AAGCGCTACA TAATTTGTCC GCTTGGCCTC AATGTCGGCG ATCAGATCCT GGCCGGCGAC
AAGGCCGACA TCAAGCCGGG CAATGCTCTG GCGTTGGCCC GCATTCCCCT TGGAACCCTG
GTGCACAACA TTGAGCTGTA CCCCGGACGC GGAGGCCAGT TGGCCCGCTC TGCCGGTGCA
TACGCCCAGG TGATCGCCAA GGAAGACAAG TACGCACTGC TCAGATTGCC TTCGGGCGAA
GTTCGCAAGG TTTTGGCCGT GAACATCGCG ACCGTCGGTC AGGTCGGCAA TATCGAGCAT
GAGAATGTCT CTATCGGTAA AGCCGGACGT AACCGTTGGC TGGGCAATCG TCCCAAGGTT
CGTGGCGTAG CGATGAACCC CGTCGATCAC CCGTTGGGTG GTGGCGAAGG CAGAAGCTCT
GGTGGACGTC ATCCCGTTAC CCCCTGGGGT AAGCCGACCA AGGGATACAA GACTCGTTCG
CCGAAGAAGC CTTCGTCCAA GTTAATCGTA AAACGCCGTG GAAGTAAGTA G
|
|---|
| Protein sequence | MAIRKLKPTS AGRRSQTVLT FDEITCTTPE KSLTKGLNKK SGRNNNGRVT MRRRGGGNKS
LYRLIDFKRN KIDVPAKVAT IEYDPNRSAR IALLHYADGE KRYIICPLGL NVGDQILAGD
KADIKPGNAL ALARIPLGTL VHNIELYPGR GGQLARSAGA YAQVIAKEDK YALLRLPSGE
VRKVLAVNIA TVGQVGNIEH ENVSIGKAGR NRWLGNRPKV RGVAMNPVDH PLGGGEGRSS
GGRHPVTPWG KPTKGYKTRS PKKPSSKLIV KRRGSK
|
|---|
| |