Gene Dbac_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2713 
Symbol 
ID8378397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3103062 
End bp3104426 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content64% 
IMG OID645001938 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003159205 
Protein GI256830477 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGC AATCCACTGT CCTTGTCATC GATGACGAAC CCGCGCACCG GCTCATGGTC 
CGCGTCGTCC TCGGCGACGC CGGCTTCAAG GTGCTGGAGG CGGACAACGG CTCGTCCGGC
CTGACCACAT TGCGCGCCAA GCCTGTGGAC GTCGTCCTGC TGGACATGCG CATGCCGGGC
ATGAGCGGTC TTGATGTGCT GCAAAAGATG CACGAGGAAG GGATCGCGAC GCCGGTGATC
ATGCTGACCG CGTTCGGCAA TGTGAGCAGC GCCGTGGAAT CCATGAAAAT TGGAGCCTGG
GATTATCTGA CCAAGCCGAC GGACAACGAC GAACTCCTGG CGGTGGTCAA AAAAGCGGCG
GAACATGTGC GCCTGACCCG CGAAAACCGC GATCTCAAAA AACAGATCGG CCAACTGCGC
GAGACCAGGA TCATCGGCAA CAGCCCGGAA ATACGCAAGG TCGTGGAGCT CATCGAACAG
GTGGGGCCCA GTGAAGCCAA CGTGCTCGTC CTCGGCGAAT CGGGCACGGG CAAGGAGCTT
GTCGCCCAGC AACTGCACGA ACAGAGCGCG CGCTGCAAAG GCCCGCTGGT CAAGGTCAAC
TGCGCGGCCC TGCCCGAAAA CCTGCTCGAA AGCGAACTCT TCGGCTACGT GCGCGGCGCC
TTCACCGGCG CGGCCCAGGA CAAACCCGGC CGCTTCCAGC TGGCCGGGGG CGGGACCCTC
TTTCTGGATG AAATCGGCGA ACTGCCCCTG ACCCTGCAGG CCAAGATCCT GCGCGCCCTG
CAGGAACGCA TCGTCGAACC CCTCGGCGGC GTGACCCCGG TCAGCATCGA CGTGCGCTTC
ATCGCGGCCA CAAACCGCGA CCTCCCGGCC ATGATCGCCG CAGGCACATT CCGCGAAGAC
CTTTATTACC GGCTCAATGT GCTCGAAATA CGCATTCCGC CCCTGCGCGA ACGCAGCGAA
GACATCCCCC TTTTGGTCGA CTACCTTCTT GACAAGCTCG GCCGCAAAAA CAACCGCCCG
ATCCGCACCG TCACCCGCGA ATTCCTGGAC GCCCTCGGCC GGCACGAATG GCGGGGCAAT
GTGCGCGAAC TTGAAAACGT CCTGGAGCGT GCCCTTATCC TCTGCCGCGC GGACACGCTG
GACCTGCGGG ACCTCCCGGA TCATCTGCTG GCTTCCGGCC CGGCGTCCCG CCCTGCGCAC
CAGGCCCAGC CCGGCGAAAG CCCGCTGGAA GCGGCCGAGC GTCAGGCCCT GGAAGAAACC
CTGCGCAAAT ACGCCGGACA CCGCGAACGC ACCGCCCAGG CCCTCGGGAT CAGCCGCCGC
ACGCTGCAAT ACCGCCTCAA GAAATACGGA TTGACCACCA GATAA
 
Protein sequence
MTQQSTVLVI DDEPAHRLMV RVVLGDAGFK VLEADNGSSG LTTLRAKPVD VVLLDMRMPG 
MSGLDVLQKM HEEGIATPVI MLTAFGNVSS AVESMKIGAW DYLTKPTDND ELLAVVKKAA
EHVRLTRENR DLKKQIGQLR ETRIIGNSPE IRKVVELIEQ VGPSEANVLV LGESGTGKEL
VAQQLHEQSA RCKGPLVKVN CAALPENLLE SELFGYVRGA FTGAAQDKPG RFQLAGGGTL
FLDEIGELPL TLQAKILRAL QERIVEPLGG VTPVSIDVRF IAATNRDLPA MIAAGTFRED
LYYRLNVLEI RIPPLRERSE DIPLLVDYLL DKLGRKNNRP IRTVTREFLD ALGRHEWRGN
VRELENVLER ALILCRADTL DLRDLPDHLL ASGPASRPAH QAQPGESPLE AAERQALEET
LRKYAGHRER TAQALGISRR TLQYRLKKYG LTTR