| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2663 |
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| Symbol | |
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| ID | 8378347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3051425 |
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| End bp | 3053686 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645001889 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003159156 |
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| Protein GI | 256830428 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCACT CTCAAGCAGA AATCATGCAC GCCGCAACCC CACCGATTTT CGAACTCAAA
AAATTCCTGC ACGCCCATAA TTGGCTGAGC ATTTTCATAT TTCGTCTCAA AGACTTCGGG
CTCTGCCGGG AACTCTACGG AGACCATGTC GCCGAAGAGT TGGAGAACCT GCTGATCAAC
GCATTGAACC AGCACGATCC GGGCAGTCCT ATGCTCAACG CCAGGCACGC GTTACGAATC
TCTTGCGGCG AGGCGGTGCT TATCCGTTGT CTGGGACAGG CCGGGGATTC TCAGCTCATG
GACCAGGCCT TCAGCCTCAA GGTCAAGCTG CAGGCCATAC TCAGAAAGCA CACCATCTCA
TCCCTCGGCA GGGAATTCGA GATCGAGGTG GGATTCGCCA TGCTGCCGGA ATCCTCACTT
TTCGAGCGGG AGCGGATTTT CCACGAGGCC ATTCGCGATG CGCGACGCAT GGCCCAGGGC
GGAATCGATC TTGAAGCGGT CAAGCTCTCG TCGACCTTCC GCTCCATCAT CCGCAACGGA
CAGATCCGCA TGCTCTTCCA GCCCATCTAC GACTTCAAGA CCGGGGCGGT CATGGCCTGG
GAAGCATTGG CACGCGGGCC GCGGGGGTCC GATTTCGAGT CGCCGTCGAT CCTCTTTGAT
TTCGCCGAAC AGTTCGGACA GCTCTTCGCC TTGGAGCAGG CCTGCCGTTC CAAGGCCATG
GAAACGGTGG GAACCCTGGC GTCAGGTCAA CGGCTGTTCC TGAACATTCA TCCGCGCACC
GTGGTCGACC CGACCTTCGC GCCCGGCAAG ACCCTTGAAA TTCTGGACAA GCATGGCCTG
AGACCCGAGG ATATTGTCTT TGAAATCACC GAACGCCATT CCATCAAGGA CTTCACCTCG
TTTCACAAAA CCCTGGACCA TTATCGCAGC CAGGGTTTCA AGATCGCCGT GGACGATGCC
GGAACGGGCT ACTCGGGCCT GTCCACCGTC GCGGCCCTGA AGCCGGACTT CATCAAGGTC
GACATGTCGC TGGTGCGCGA TGTGGACAAG GACCCTGTGC GCAGGGCGCT GATGGAGACC
ATGGTCACCC TGGCTGGCCG CATCGGCTCG GAGATCATCG CCGAAGGGAT CGAAACCAAG
GGCGAGGCCC GGACATTGAC GGAGATCGGA GTCCATTTCG GCCAGGGGTA TTACCTGAGC
CGCCCGCATT TCCCCAAACC CGAGACCCCG CTGGACATGA AGGAGCTTAC CCCGCTTCGT
TCGGACAACT TCGGCAGGCT CTCCTGCTCG ATCCCCATCG GACAGCTGGT GCAAAAGACG
CTGACGGTCA GCCCGCGTAC TCCGGTCCAA TCAGTGCAGC GGATCTTTGC CACAAATCCG
GCGCTCTCAA GCGTGGTCGT CGTCGAGGAT GGGATACCCC GTGGGCTGGT CATGGGCTAC
AGCCTGGACC GGCACCTGGC CACTCTTTAC GGGCGCGCGC TGTACGCGGA AAAGCCCGTG
GCCGTGCTCA TGGACACCAC GCCCATGATC GTCGACGAGC GCGAACCCGT GGAATCCGTG
GCCAAGGACG CCAACACCCG CGAAATGCTC AAAGCCTACG ACGAGGTCAT CGTCACCAGC
GGCGGACAGT TTCTGGGCGT GGTAACGGTG CAGAAGATGC TGACCACCCT GGCGCAGGTG
CAGGTCGAGA TGGCCAAGGG TACCAACCCC CTGACAGGCA TTCCGGGCAA CGTGGCCCTG
GAAAAGGAAA TCGAGACACG GCTCAGAAGG GCCAAGCCCT TTTGCATGCT TTATGCGGAC
CTGGACAATT TCAAGGTGTA CAATGACGTC TACGGCTTCA AGGACGGCGA CTTTGTCATT
CTGCTGCTGG GCCGCATCAT GACCTGGGCC ATCTCCCGGC ATGGGCACAG CGGAGACTTT
CTGGCCCACA TCGGCGGGGA TGACTTCGTG GCCATGGTCA ATCCGGAAAA GGCGGAACGC
ATCTGCCAGG CCGTGACCCG CTGCTTCAAG AGGCTCATCC TGAACTGCTA CCATACCCAG
GACCGCGCCA GAGGATGGAT CATGGGCAAG GGTCGCGACG GCAAGGAACA GCAGTTCCCG
CTTGTCTCCG TCTCCATCGG CATCGTGGAC TGCATGGCTC CGTGCAGTCT GCAGGCCCTG
GGGGAAAAAG CGGCCCAGAT CAAGGGCTAC GCCAAGACCC TGCCCGGCAA TGTCTATGTC
CGTGACCGGC GTGGCAGCTC CGGATGCGGA CAGGCGGCCT GA
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| Protein sequence | MSHSQAEIMH AATPPIFELK KFLHAHNWLS IFIFRLKDFG LCRELYGDHV AEELENLLIN
ALNQHDPGSP MLNARHALRI SCGEAVLIRC LGQAGDSQLM DQAFSLKVKL QAILRKHTIS
SLGREFEIEV GFAMLPESSL FERERIFHEA IRDARRMAQG GIDLEAVKLS STFRSIIRNG
QIRMLFQPIY DFKTGAVMAW EALARGPRGS DFESPSILFD FAEQFGQLFA LEQACRSKAM
ETVGTLASGQ RLFLNIHPRT VVDPTFAPGK TLEILDKHGL RPEDIVFEIT ERHSIKDFTS
FHKTLDHYRS QGFKIAVDDA GTGYSGLSTV AALKPDFIKV DMSLVRDVDK DPVRRALMET
MVTLAGRIGS EIIAEGIETK GEARTLTEIG VHFGQGYYLS RPHFPKPETP LDMKELTPLR
SDNFGRLSCS IPIGQLVQKT LTVSPRTPVQ SVQRIFATNP ALSSVVVVED GIPRGLVMGY
SLDRHLATLY GRALYAEKPV AVLMDTTPMI VDEREPVESV AKDANTREML KAYDEVIVTS
GGQFLGVVTV QKMLTTLAQV QVEMAKGTNP LTGIPGNVAL EKEIETRLRR AKPFCMLYAD
LDNFKVYNDV YGFKDGDFVI LLLGRIMTWA ISRHGHSGDF LAHIGGDDFV AMVNPEKAER
ICQAVTRCFK RLILNCYHTQ DRARGWIMGK GRDGKEQQFP LVSVSIGIVD CMAPCSLQAL
GEKAAQIKGY AKTLPGNVYV RDRRGSSGCG QAA
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