| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2555 |
|---|
| Symbol | |
|---|
| ID | 8378234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2911806 |
|---|
| End bp | 2913347 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645001776 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_003159048 |
|---|
| Protein GI | 256830320 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAC AGATTAAGAA CCGAACAGAG CGGGCTGTTA AAGGTGCCCT TGTTAGTTTT
TTGCAATACG GGACGCAGAT GGTCTTGCAA CTTTTTCTGG CCCCCTTGGT TCTTCGTATT
GCCGGTCAGG AGACGTTGGG CGCGTATGCT CTGCTGATGC AGGTACTCGG CTATCTTGCT
ATGTTAGACT TGGGTATTTC TGTTTCTCTC AACGTCTTCA TGGCGAGAGC GACTGGATGC
GACGATTCTG GAAAACGTCT GGTAGCTGTA TTGTCTACTG CAAGGACGTT TTTGTGTATT
AGTAATGCAC TCATAGCAAG TATCATTTTT CTGTTTAGTA CTCGATTAGG AATATTTTTT
TCATCTACAC AACAAACTGT TGAATCTATT CAGTACGGTA TGTTAATACT TGCGACATGG
CAGGCGCTCA AATCTCCATG GAGTGTATTT GGAATCGGCC TGAGCGCGAC ACAAAATTTA
GCAACCTCCG GTGTTATTGG GATTATTGGC AATGCAGGAC GGCTTATTTT CTCATTGGGG
TTCCTTTTTC TTGGAATGGG CTTGGCGGGG TTGATACTTG GGCATGTTCT TGCGGAAGCG
TTAAATTTTA CACTTTCGTC TTGGCAGTTC CGTAAAACAT ATCCTTCGCT CAAACCTAGG
TGGGGGATTT CAGATCGGGT TCTATTGAAG GAAATGCTAT CATTTGGCCT TCAGTCAATG
CTCATCAATA TCGCTTGGCG CTTGGTTTAT CTTACCGATA ATATAGTAGT AGGCTACCTT
TTTGGAGCAG CGGCAGTTAG TGTGTACTAT TCAACGCAAA TGCCGACTAC TATTGCTTTC
AACATTGTGA ATCGTATACA CGATAATGCC TCTCCTGCAT TGAATGAGAT TTCTGCGCGT
GGTGAAGCCA GAAAGTTACG TGATTCATTC TTGAAGTTAC ATCGATATAG CCTGTTATTT
GCGCTTCCTT TGGCTGGAGG AATATATTTA CTCAACCAAA AATTTGTAAC GTTGTGGGTT
GGTTCAGGAC AGTATGCGGG TGACACAATG ACCACAGCTT TGGCTGCGTT TGTGCTATTA
ACAACCATTA ATCATCTCAG CTTTATTTTC TTTATATCAT CAGGCAGGAT TTTACTATTC
GGAATTATAG GGGTTTTGGA AGGTTTGACT AATCTCGGGC TTTCTATCTG GCTTGGTAAA
ATTATCGGCC TAGAAGGAGT CATGCTGGCG AGCGTGATTG CCAACATTCC AGCAACCGCG
TTGGTTCTCT ATATTTCCAT GCGAAGACTA GGAATTGGCG TTCTAGAATA CCTCCGTCTT
TGTGTTTTCC GCTCAATTGT TCCTGCGACA GTAGGTTATC TGTTAGCCTA TATGGTAGGA
ATACTACTTC CTAGCGAGGG GTGGTTTACG TTCATTGCCC AAGGAACGAC TATGGTCACG
GTGTGCGGTG GAGTGACATA TTTATTTTGT TTACTTAATT ATGAACAAGA TGTTGTGCGA
AGAGTATTTA ATAAAATAAA TTTTTGTCAA TATTATAAAT GA
|
|---|
| Protein sequence | MPAQIKNRTE RAVKGALVSF LQYGTQMVLQ LFLAPLVLRI AGQETLGAYA LLMQVLGYLA
MLDLGISVSL NVFMARATGC DDSGKRLVAV LSTARTFLCI SNALIASIIF LFSTRLGIFF
SSTQQTVESI QYGMLILATW QALKSPWSVF GIGLSATQNL ATSGVIGIIG NAGRLIFSLG
FLFLGMGLAG LILGHVLAEA LNFTLSSWQF RKTYPSLKPR WGISDRVLLK EMLSFGLQSM
LINIAWRLVY LTDNIVVGYL FGAAAVSVYY STQMPTTIAF NIVNRIHDNA SPALNEISAR
GEARKLRDSF LKLHRYSLLF ALPLAGGIYL LNQKFVTLWV GSGQYAGDTM TTALAAFVLL
TTINHLSFIF FISSGRILLF GIIGVLEGLT NLGLSIWLGK IIGLEGVMLA SVIANIPATA
LVLYISMRRL GIGVLEYLRL CVFRSIVPAT VGYLLAYMVG ILLPSEGWFT FIAQGTTMVT
VCGGVTYLFC LLNYEQDVVR RVFNKINFCQ YYK
|
|---|
| |