Gene Dbac_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2456 
Symbol 
ID8378134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2821549 
End bp2822271 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID645001678 
Productnuclease (SNase domain protein) 
Protein accessionYP_003158951 
Protein GI256830223 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.127297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCTA GGCCGGGCAA GACTGCAAAT CCTAAGGCAA CCCCCGGGGT TGCCTTCTTT 
TTTGGGGTGC CGGTTCGGGT AATTCTTGGC GCCGTGCTGC TGCTTGCTTT TGCGCAGGGA
GCCCTGGCCG AGACGTGGCG CGTCGGGGTC GGGAAAGTTC TGGACGGCGA TACCCTGATT
CTTGACGGTG GGCAGCGTCT GCGGCTGCGC GGTATCGACG CACCCGAGGT TTCGCGCCGG
GACAAATCCG GGCAGTATTA CAGCGGGGAG TCCCGAAGCA GGCTTTCCGC CCTGGTTTCT
GGCCGGATTC TCGTGCTCGA CACAGAGGAA CTCGGCACGG ACCGCTACGG ACGGTTGGTC
GGAGTCGCGC GGCTCGCGGA CGGACGAATG GTCAACCTGC TGATGATTGA AGGAGGGGCG
GCTTTCGTTT ATCCTCACGC GTCCGACAAG GACAGGGACT TGACGCGTCG ATTGCGTGCG
GCCCAGACCA CGGCCATGGA CCAGGGACAG GGTTTTTGGC CGGCCCTGCT GCGCTCTCGC
GGGGCGAAGA CGGGGTATAT GGGCACCAAA AGCACCAAAC GTTTCCACAC CTTGTCCTGC
GTGCAGGGGC GCAAGGTCGG TGCCGCCAAC CGGGTAAATT TTTCTTCCTT GCAGGAAGCC
TTCGCGGCCG GTTATGCACC GGCGCGGGAG TGTTCCCCAT GGCCTGCGGA AACGGGCCGC
TAG
 
Protein sequence
MSPRPGKTAN PKATPGVAFF FGVPVRVILG AVLLLAFAQG ALAETWRVGV GKVLDGDTLI 
LDGGQRLRLR GIDAPEVSRR DKSGQYYSGE SRSRLSALVS GRILVLDTEE LGTDRYGRLV
GVARLADGRM VNLLMIEGGA AFVYPHASDK DRDLTRRLRA AQTTAMDQGQ GFWPALLRSR
GAKTGYMGTK STKRFHTLSC VQGRKVGAAN RVNFSSLQEA FAAGYAPARE CSPWPAETGR