Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2456 |
Symbol | |
ID | 8378134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 2821549 |
End bp | 2822271 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645001678 |
Product | nuclease (SNase domain protein) |
Protein accession | YP_003158951 |
Protein GI | 256830223 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.127297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCTA GGCCGGGCAA GACTGCAAAT CCTAAGGCAA CCCCCGGGGT TGCCTTCTTT TTTGGGGTGC CGGTTCGGGT AATTCTTGGC GCCGTGCTGC TGCTTGCTTT TGCGCAGGGA GCCCTGGCCG AGACGTGGCG CGTCGGGGTC GGGAAAGTTC TGGACGGCGA TACCCTGATT CTTGACGGTG GGCAGCGTCT GCGGCTGCGC GGTATCGACG CACCCGAGGT TTCGCGCCGG GACAAATCCG GGCAGTATTA CAGCGGGGAG TCCCGAAGCA GGCTTTCCGC CCTGGTTTCT GGCCGGATTC TCGTGCTCGA CACAGAGGAA CTCGGCACGG ACCGCTACGG ACGGTTGGTC GGAGTCGCGC GGCTCGCGGA CGGACGAATG GTCAACCTGC TGATGATTGA AGGAGGGGCG GCTTTCGTTT ATCCTCACGC GTCCGACAAG GACAGGGACT TGACGCGTCG ATTGCGTGCG GCCCAGACCA CGGCCATGGA CCAGGGACAG GGTTTTTGGC CGGCCCTGCT GCGCTCTCGC GGGGCGAAGA CGGGGTATAT GGGCACCAAA AGCACCAAAC GTTTCCACAC CTTGTCCTGC GTGCAGGGGC GCAAGGTCGG TGCCGCCAAC CGGGTAAATT TTTCTTCCTT GCAGGAAGCC TTCGCGGCCG GTTATGCACC GGCGCGGGAG TGTTCCCCAT GGCCTGCGGA AACGGGCCGC TAG
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Protein sequence | MSPRPGKTAN PKATPGVAFF FGVPVRVILG AVLLLAFAQG ALAETWRVGV GKVLDGDTLI LDGGQRLRLR GIDAPEVSRR DKSGQYYSGE SRSRLSALVS GRILVLDTEE LGTDRYGRLV GVARLADGRM VNLLMIEGGA AFVYPHASDK DRDLTRRLRA AQTTAMDQGQ GFWPALLRSR GAKTGYMGTK STKRFHTLSC VQGRKVGAAN RVNFSSLQEA FAAGYAPARE CSPWPAETGR
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