Gene Dbac_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2448 
Symbol 
ID8378126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2811504 
End bp2812172 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content66% 
IMG OID645001670 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_003158943 
Protein GI256830215 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.325008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCG CGCTTGGCGT TCTCGTTTCC GGTTCCGGGT CCAACCTGCA GGCCATCATC 
GACAGGGTGG GCGACGGCAG CCTCGACGCG GACATCCGCA TCGTCATCGC CAACAAACCC
GACGCGCAGG GACTTGAGCG CGCGCGGAAG GCGGGCATCG CCACAGCCTG CGTGCGTCAT
GACGAGTTTC CCGAGCGGGA GAGTTTCGAC CGCGAACTGG TCCGGCTGCT GCGGGAGGCT
GAGGCCCGGT TCGTGGCCCT GGCCGGGTTC ATGCGCATCC TGACGCCTGT GTTTTTGACG
CCCTTTGCCG GGCGCGTGAT CAATATCCAT CCGGCCTTGC TCCCGGCCTG TCCGGGTCTG
CGCGCCCAGG AGCAGCAGGC CGGGCACGGG GTGCGGCTGG CCGGGTGCAC CGTGCATTTC
GTGGATGAAG AGATGGACCA CGGCCCGATC ATCATCCAGG CCGCCGTGCC CGCCTATGCG
GACGACGATG AGGCCACGCT CGGCGCGCGT ATCCTTGAGA TGGAGCACCG CATCTATCCC
CAGGCCCTGC AATGGATCGC ACAGGACCGG GTGCAGGTCG TCGGACGGCA GGTCGTGGTC
CGCGGCGCGT CCAGAACCAT GGGCACGCTG TGGGCCAATC CGCCTTTGGA AAGGCCTTTT
GATTCTTGA
 
Protein sequence
MTIALGVLVS GSGSNLQAII DRVGDGSLDA DIRIVIANKP DAQGLERARK AGIATACVRH 
DEFPERESFD RELVRLLREA EARFVALAGF MRILTPVFLT PFAGRVINIH PALLPACPGL
RAQEQQAGHG VRLAGCTVHF VDEEMDHGPI IIQAAVPAYA DDDEATLGAR ILEMEHRIYP
QALQWIAQDR VQVVGRQVVV RGASRTMGTL WANPPLERPF DS