| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2418 |
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| Symbol | |
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| ID | 8378096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2773656 |
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| End bp | 2774579 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645001640 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003158913 |
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| Protein GI | 256830185 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0980712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCC CGGGCCTGAA ACAACTTGAC GGGGTGCTGG TTTTGCATAA ACCGGGAGGC
CCGACCTCTG CGGATTGCCT GAATCAGATC AAGCGCCGCC TGGGGCAAAA AAAAATCGGC
CACGCCGGCA CCCTCGACCC TATGGCAACG GGCGTGCTGG TGGTCCTGCT CGGACAGGGC
ACGAAGCTGG CCGGGTATTT GAGCGATGAT CGCAAAACCT ACCGGGGACG CCTGATCCTG
GGGCAGGCCA CGGACAGCTA CGATGTGCAG GGCAAGGTGC TCTCCGAGGC ACCCTGGGAA
CACCTGGACC CGGAAGCAGT GCGGAGTGAA GTCCTCGGCT GGAAGGGGAC CATGAGCCAG
GAAGTGCCCC CCGTATCGGC GGCCAAGCAC CAGGGCAAGC CCCTGTATGC CTTGCACCGG
GCCGGTAAAG AGGTCCCGGT CAAAGTCAAG GATGTGACAA TTTTCGACTC GCAGCTTCTA
TCCATGGAGC TGCCGAGTGT TCATTTTCGA GTCACCTGTT CCGCAGGAAC CTACATCCGC
TCCCTGGCCC ACAGCCTGGG GATGCGACTT GGGTGCGGAG CGGTGCTCAG CGAACTGGAG
CGGGAGGCAA GCCACCCGTT CACCCTCGCC CAGGCTCATA GTCTGGAAAC GGTGCTGGAA
AGCGGGGATC AGCTTCATGA GCTGGTCCTG CCCATGACAA ATGCCCTGCC CCACTGGCCC
AAGCTCGTGC TCGACCCCGA GCAGACCGCG CTGGTCCAGA ACGGGGCATG GCTGCCAACC
AGCCTCTTTC CCGATTATCC GGCCCAGGAA GGGGACCGGG CGCTCATGCT CTCTGCCGAT
CGGGCCCCCC TGGCCCTGAT GGAAGCGGGC ATGCGCACGG GCGTCCTGTC CTGGGTCATC
CTGCGCGGGC TTTGGCAAGC CTGA
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| Protein sequence | MSVPGLKQLD GVLVLHKPGG PTSADCLNQI KRRLGQKKIG HAGTLDPMAT GVLVVLLGQG
TKLAGYLSDD RKTYRGRLIL GQATDSYDVQ GKVLSEAPWE HLDPEAVRSE VLGWKGTMSQ
EVPPVSAAKH QGKPLYALHR AGKEVPVKVK DVTIFDSQLL SMELPSVHFR VTCSAGTYIR
SLAHSLGMRL GCGAVLSELE REASHPFTLA QAHSLETVLE SGDQLHELVL PMTNALPHWP
KLVLDPEQTA LVQNGAWLPT SLFPDYPAQE GDRALMLSAD RAPLALMEAG MRTGVLSWVI
LRGLWQA
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