Gene Dbac_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2388 
Symbol 
ID8378065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2743546 
End bp2745429 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content60% 
IMG OID645001609 
Productasparagine synthase (glutamine-hydrolyzing) 
Protein accessionYP_003158883 
Protein GI256830155 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGCA TAGCCGGCTT CTTCAACCCC AGCGGAATCT CTTTTCAACG CGACGTTCTT 
GCGTCCATGG CCCAGGCCCT GGCCCATCGC GGACCGGACC ACCAGGGCCT GTTCCAGGAC
CGTTGCTGCG CCCTGGCCTA CAGGCGGCTC TCCGTCATAG ATCTGGCAGG GGGCAACCAG
CCTGTGATCC ACGAACCATC CGGCGCGGTT CTGGTCTTCA ACGGCGAAAT CTACAACTAC
CAGCCGCTGC GGGCCGAACT TGCCAGTCTT GGCCATGTTT TCCGCACGCA TTCGGACTCG
GAAGTCCTGC TCGCGGCCTA CCTGCAGTGG GGCGACACAT GTCTGCGCCG CCTGGTCGGC
ATGTTTGCCT TCGCGGTCTG GAACCCACGG GAGCAGACCC TTTTCCTGGC TCGGGACCGC
ATGGGCAAGA AGCCGCTTTT TTATACGCTC CTGCCCGACG GAACACTGAT CTTCGCCTCG
GAGATCAAGT CCATCCTGCA CTTCCCGGGC GTGCCGCGCC GCATGAATCC CCTGGCCATG
GACCGGATGC TGGACTACGG ATTCAACCTG GCCCCCGACA CATTTCTGCA AGGAATCCAT
CAGGTTCTGC CCGCCCACAC CCTGCTCGCC GGCCGCAACG GGCAGCGAAC CGCCCCCTAT
TGGGACATCC CCATGGAAAG CCCGGTCTCG GCAATCTCCG AAGATGAAGC CGCCGAGGGC
CTGCGCCATC ATCTGGTCGA AGCCGTGCGC GACCGGCTCG TGGCCGATGT GCCCGTGGCC
TGCTACTTAA GCGGCGGCAT CGACTCCAGC AGCGTGACCG GCCTTTATGC GAACCTCTCA
AACGCCCCTG TCCACACCCT CTCCATCGCC TTCGAGGACG CGGGCTATGA CGAACGCCAT
TTCGCGCGCA TGGTTTCAAG CTCGTTCGGC ACCAGCCACC ACGAATTTTT CTGCGCCATC
GCCCAGGAGG AAATCGAGAA ACTGGTCTGG CATTTGGAGA GCCCGCTGGT CACCCTTCTG
AATCTTCCGT TCTATCTTTT ATCCAGGCAA ATAAGGGACA TGGGATTCAA AGTGGTCCTG
TCCGGTGACG GGGCCGACGA AATCCTGGGC GGATATGACT ATTTCAAGCT CGTAAAGCTC
ATGAACTTCA TCGGCAGAAA CGAAACTGTT GGCCGCGCGA ACCTGCTGCG CCGGGTCTTT
CCCGGCATTT CCACGCCGCA GCAGGCCTGG ATGCAGTACG CGATGCTGAA GGGATATCCC
GCCGCGCACC CGGCTCTGCC CTACAGGTTC CAGGCTTTCC AGTTCAAGAA CCAGCTCATG
AGCGAATCCT TCGTGAACCG CCTTCTGCCC ATAATCGGCG AACGGGACGA GGAATTACCC
GTGGTTCCGG GATCCCGGTC ACTCCTGGAC CAGGCCCTGT ACCTGGAAAC CAAGATGCGC
CTGCCAAACC TGACCCTGGC CCTGGCCGAC ACCATGAGCA TGGCCAACTC CGTCGAGCTG
CGTTCGCCGT TCATGGATCA CCGGCTGGTG GAGTACGTCT TTTCCCTGCC CAGCCACTTC
AAGATGCGCG GCCTCAATGA GAAGTACCTG CTTAAAAAAA GCTTTCGAAC CTTCCTGCCC
CCGGCCATCA GCCAGCGCCG CAAACAGCCG CTGTCCCCTC CGGGCAAATG GTTCATACGC
ATGTTCCGGG ACATGATCGG CGATGTGCTC TCTGCCGCCA CCGTCCGCGA AAAAGGGTAT
TTCAGACCTG AATTCACGGA CCACATGCTC GGCGAATTCG ATTCCGACAG CCCCATGGAT
TACAGCGGCG TAATCATTGT CGCCTTCTTC GTGCACCTCT TCGACGATCT CTTTGTATCC
GCCAAAACCC CCGGCGGTTG CTAA
 
Protein sequence
MCGIAGFFNP SGISFQRDVL ASMAQALAHR GPDHQGLFQD RCCALAYRRL SVIDLAGGNQ 
PVIHEPSGAV LVFNGEIYNY QPLRAELASL GHVFRTHSDS EVLLAAYLQW GDTCLRRLVG
MFAFAVWNPR EQTLFLARDR MGKKPLFYTL LPDGTLIFAS EIKSILHFPG VPRRMNPLAM
DRMLDYGFNL APDTFLQGIH QVLPAHTLLA GRNGQRTAPY WDIPMESPVS AISEDEAAEG
LRHHLVEAVR DRLVADVPVA CYLSGGIDSS SVTGLYANLS NAPVHTLSIA FEDAGYDERH
FARMVSSSFG TSHHEFFCAI AQEEIEKLVW HLESPLVTLL NLPFYLLSRQ IRDMGFKVVL
SGDGADEILG GYDYFKLVKL MNFIGRNETV GRANLLRRVF PGISTPQQAW MQYAMLKGYP
AAHPALPYRF QAFQFKNQLM SESFVNRLLP IIGERDEELP VVPGSRSLLD QALYLETKMR
LPNLTLALAD TMSMANSVEL RSPFMDHRLV EYVFSLPSHF KMRGLNEKYL LKKSFRTFLP
PAISQRRKQP LSPPGKWFIR MFRDMIGDVL SAATVREKGY FRPEFTDHML GEFDSDSPMD
YSGVIIVAFF VHLFDDLFVS AKTPGGC