Gene Dbac_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2282 
Symbol 
ID8377957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2619238 
End bp2621133 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content63% 
IMG OID645001504 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003158780 
Protein GI256830052 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTC CGTACGAAAC CACCCTCCCG AGGCTGCTCC TCGAAAACAG CCGCAACCGT 
CCCGGCCGCA CGGCCCTGCG CGAAAAAAGC TTCGGCATCT GGCAGCCCTT TTCCTATGCC
CAGTACTGGA CCATCACCGC CGAATTCGCG GCGGGCATGA AGGCCCTGGG CCTGGGCCGG
GGCGACATCA TCGTCATCAT CGGCGACAAC CGCCCCGAGT GGCTCTGGGC GCAGCTGGCC
ATCCAGGGTC TGGGCGGCGT GTCTCTCGGG CTGTATCAGG ATTCGCCGGG AGAAGAGATC
GGCTACGTGT TCGAACTCTC GAAGGCCCGC CTGGTGGTGG CCGAGGATCA GGAACAGGTC
GACAAAATCC TGTCCATCAA AGACTCCCTG CCGCTCCTCG AATACATCGT CTATCACGAC
TCCAAGGGCC TGATCGGGTA CGACAGGTCG GGGCTCAAAT CCTTCGACGA AATCCGCGCT
CTGGGCAAAG AGCGGGCGCA CGAATTCGAG AGCTGGATAA AGGGCGTCTC CCCGGACGAC
ACGGCGCTCA TCGCCACCAC CTCAGGCTCC ACCGGTCGGC CCAAGCTGGC CATGCTCTCG
CACAAAAACC TCCTCTCCAT GGCCTGGAAC CTCGGCCAGT CCGATCCAAA GCGCGATTCC
GACGAGTTCG TGTCCTTCCT GCCCCTGGCC TGGATGGGCG AACAGATGAT GGCCGTGTCC
TCAGCCCTGT TGTTCGGATT CTGCGTCAAT TTCCCCGAAG AGCCGGACAC CGTGCAGGAG
AACATCCGCG AGATAGGGCC GCACCTCATC TTCTCGCCGC CACGGGTCTG GGAGAACATG
GCCGCCAAGG TCCGGGTGCG CATCATGGAG ACCACCCGCT TCAAGCGTTT TCTCTTCAAT
ACGTTCATGC CCATCGGCCT GAAATACGCA GACGCGGTGC TACGCGGCGA GACGCCTTCG
GCGGGACTGC GCATGGCCAA CAAGCTGGCC GACTGGGGCC TCTTCCGGGC GCTGCGGGAC
CGGCTCGGCT TTTCACGGGT GCGCTCAGCC TCCACGGGCG GAGCACCGCT CGGCCCTGAC
ACCTTCACCT TTTTTCACGC CATGGGCGTG AACCTGAAGC AGATTTACGG CCAGACCGAG
ATCGCGGGCA TCTCCTGCAT CCACCGCGAC GGCGCGGTCA GCTTCGAGTC CGTGGGAGAG
CCCATTGCCG GAACCGAGAT CCGCATCTCC GAGGACGGCG AGATCCTGTC CAGAAGCGCC
GCCGTATTCA AAGGCTATCT CGGCAACGAC GCCGCCACCG CCGAGACCAT CACGGACGGC
TGGCTGCGTT CGGGCGATGC CGGGTTCTTC AAGGACAACG GTCAGCTCGT CATCATCGAC
CGCCTCTCCG ACGTCATGAC CACGGGCAAG GGCGTGCGTT TCTCGCCGCA GTTCATCGAG
AACAAGCTCA AGTTCTCGAC CTATGTGCAG GAAGCCGTGG TCCTCGGACA CGAACGCGAG
TTCATCACCG CCATCATCTG CCTAGACGGG GACATCGCCG GCCGCTGGGC CGAGTCCAAG
GGCCTGACCT ACACCACCTA CCAGGATCTG GCGGCCAAGC CCGAGCTCTA CGACCTGATC
GAGTCCGAAA TCCGGAGCAT CAACCCGTCC CTGCAACCCG GCACCGAGGT GACGCGCTTC
GCCCTGCTCT TCAAGGAACT CGACGCCGAC GACGGCGAAC TGACCCGCAC GAGGAAGATC
CGGCGCAAAG TCATCAATGA GCGCTACGTG GAGCTGATCG CCGCGCTGTA CGACGGCACG
GACAACACGG ACCTGTGCAT CGCCATCACC TACCAGGACG GCTCGCACCG CGAGATGACG
GGCGCGATCT GCATCCGCGA CATCCGGCAA CAGTAA
 
Protein sequence
MTAPYETTLP RLLLENSRNR PGRTALREKS FGIWQPFSYA QYWTITAEFA AGMKALGLGR 
GDIIVIIGDN RPEWLWAQLA IQGLGGVSLG LYQDSPGEEI GYVFELSKAR LVVAEDQEQV
DKILSIKDSL PLLEYIVYHD SKGLIGYDRS GLKSFDEIRA LGKERAHEFE SWIKGVSPDD
TALIATTSGS TGRPKLAMLS HKNLLSMAWN LGQSDPKRDS DEFVSFLPLA WMGEQMMAVS
SALLFGFCVN FPEEPDTVQE NIREIGPHLI FSPPRVWENM AAKVRVRIME TTRFKRFLFN
TFMPIGLKYA DAVLRGETPS AGLRMANKLA DWGLFRALRD RLGFSRVRSA STGGAPLGPD
TFTFFHAMGV NLKQIYGQTE IAGISCIHRD GAVSFESVGE PIAGTEIRIS EDGEILSRSA
AVFKGYLGND AATAETITDG WLRSGDAGFF KDNGQLVIID RLSDVMTTGK GVRFSPQFIE
NKLKFSTYVQ EAVVLGHERE FITAIICLDG DIAGRWAESK GLTYTTYQDL AAKPELYDLI
ESEIRSINPS LQPGTEVTRF ALLFKELDAD DGELTRTRKI RRKVINERYV ELIAALYDGT
DNTDLCIAIT YQDGSHREMT GAICIRDIRQ Q