| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2256 |
|---|
| Symbol | |
|---|
| ID | 8377931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 2598091 |
|---|
| End bp | 2600904 |
|---|
| Gene Length | 2814 bp |
|---|
| Protein Length | 937 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645001478 |
|---|
| Product | D-lactate dehydrogenase (cytochrome) |
|---|
| Protein accession | YP_003158754 |
|---|
| Protein GI | 256830026 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000277534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCTT CAAAATATCG TGCCTTCCAC AACGCGGTGG CCGCATTCGT CCCCATCGCG
CGCATCATCA CCGATCCCTT GCGTCTGCTG GCCTATGGCA CCGACGCGAG CTTCTATCGC
CTCGTGCCGA AAATCGTCAT CAATGTGGAA AACGAGGCCG AGGTGGCCCG TATCCTGCGC
CTGGCATACA AGAGCCGCAT CCCCGTGACC TTCCGCGCCG CCGGGACCAG CCTCTCCGGC
CAGGCCGTGA CGGACTCGGT GCTGATCCGC CTCGGTGAAG GATGGCAAGG CTGCCGCGTC
TATGACCAGG CCCGCCGCAT CGACCTTGAA CCCGGCATCA TCGGCGCCCA CGCCAACCGC
ACCCTGGCCC CATTCGGCAA GAAGATCGGC CCGGACCCGG CCTCCATCGA CAGCTGCAAG
ATCGGCGGCA TCCTGGCCAA CAACGCCAGC GGCATGTGTT GCGGCGTGGC CGAGAACAGC
TACCAGACCC TTGAAGAGCT GCGGCTCATC CTGGTCGACG GCACGGTCCT GGACACCGGC
GACGACGAAT CCAAGCGCAG GTTCCGGGAA AAGCACCCGG AAATAGTGGA AGGGCTGGCG
GATCTGAGGC GTCAGGTCAT AAGCGCCCCG GAACTTGAAG CGCGCATCCG CCACAAGTTC
AAAATCAAAA ACACCACGGG CTACAGCCTG AACGCACTGG TCGATTTCGA GGACCCGTTC
GACATCCTCA AGCATCTCCT GGTCGGATCC GAAGGAACGC TGGCCTTCAT CTCCAAGGTC
ACCTACCGCA CCGTGACCGA GCACGCCCAC AAGGCCTCGG CGCTGATGCT CTTCCCGGAC
ATCCGCACCG CCTGCGAGGC GACCATCATT TTGAAGAAGC AACCCGTGGC CGCCGTGGAA
CTCATGGACC GCCCGGCGCT TCGGTCAGTG CAGGACAAGG ACGGCATGCC TCCCTACCTA
CGTGAACTGT GCGATACCGC CGCCGCCCTG CTGGTCGAGA CCCGCGCCGG GGACAAGGCG
GAGCTCGACG CCCAGATCGA AACCATCAAG GCCGCCCTGG CCGGGGTGAA CATGGTCCGC
GAGATCGAGT TCACCCCCGT GCCGCAGGAA TTCGCCAAGC TATGGAACAT CCGCAAGGGC
CTCTTCCCGG CCGTCGGCTC GGTGCGGGCC ACCGGCACCA CGGTCATCAT CGAGGATGTG
GCCTTCCCCA TCGAGCGCCT GGCCGACGCG ACCCTGGAGT TGCAGGGTCT GCTCGATACA
TACGGCTACT CAGAAGCCAT CATCTTCGGC CACGCGCTAG AAGGAAACCT GCACTTCGTC
TTCACCCAGG ATTTCGGAGA CCCCAAAGAA ATCGAGCGCT ACAGCAAACT CATGGACGAC
GTGACCGTGA TGGTCGTCGA GAAATACGAC GGCTCCCTCA AGGCCGAGCA CGGCACGGGC
CGCAACATGG CGCCCTTTGT CGAGATGGAG TGGGGGCAGG ACGCGTACCG GCTCATGCAG
GACATAAAGC GCATCTTCGA CCCGCTGACG CTCCTCAATC CGGGCGTCAT CCTGAACCCG
GATCCCAAGG CCCACCTGAA GGACTTGAAA CCCCTGCCTG CCGCCCACGA ACTGGTGGAC
AAGTGCATCG AATGCGGGTT CTGCGAACCC ATCTGCCCCT CCAAGCACAT AACCCTGTCC
CCGCGCCAGC GCATCACGTC CTGGCGTGAA ATCCAGCGAC TTCAAGGCAA GCCCGAACAC
AAGACGGAGC TGGCCAAGCT TTTAAAAGCC TACGGCTACC AGGGTGACGG CACCTGCGCC
ACGGACGGGC TGTGCGGCAC GCGCTGCCCC GTGGGCATCG ACACGGGCAA GATGACCAAG
GCCCTGCGCG CCGAAAGCGC GACCATACGG CAGAAAAAAG CCGCCGACTG GATCGGAGAA
CACTTCGCGG GCGTGGCCCG GACCGTGTCC GGGGTGCTGC AGGCCGTGGA CGCGGTGCAT
GCCGTGGCCG GGACAAAATT TATGGATGTG TCCTCCGAAA CCCTGCATCG CATGACGGGC
AAGCGCGTCC CGCGCTGGAA CGCGCAGATG CCGGGAGGAA TCAGCCGCAT CCGCCGCGAA
AAGGTGAATG AAGGCAACCC GCTGAAAGTG GTCTACTTCC CGAGCTGCAT CGCCCGCAAC
ATGGGTCCAT CCCGCTGCGA AAAGATCCGT CCCCTGCCCG AGACCACGGT GAGCGTGCTG
CGCAAGGCCG GATACGAGGT CATCTTCCCT GAGAACATGG CCGCGCTGTG CTGCGGTCAG
GCCTTTGAGA GCAAAGGCTT CGTGGCCCAG GCCGACGTCA AGAGCGCTCA GCTCGAAGAG
GCGCTCCTGA CCGCAAGTCG AAATGGAGCC CTGCCCGTGC TGTGCGATAC CAGCCCATGC
CTCAAGCGCA TGCAGGAGGT GCTGGACCCG CGCCTCAAAA TCTATGACCC GAGCGTGTTC
GTGCTGGAGT TCCTGCAGGA CAAGCTGACC TTCACGAAAA AAGACAAACG CGTGGCCCTG
CATGTGACCT GCACGTCCCG CAAGCTGGGC CTCGAAGGCA AGCTGCTGGA GCTGGCCAAA
AAATGCGCCG CCAAGGTGGT CGTACCGGAG GACATCTTTT GCTGCGGCTT TGCCGGGGAC
AAGGGCTTTT CCGTACCGGA ACTGAACGCC TCGGCCCTGA AAACCCTGGC CGAGAAGGTC
GAGGACTGCA CCGAAGGCTA CTCCACCAGC CGGACCTGCG AGATCGGCCT GGCCCTGCAC
GGCGGCATCC CGTACCGCAA CATCCTCTAC CTGGTGGATG AATGCACGGC CTGA
|
|---|
| Protein sequence | MLASKYRAFH NAVAAFVPIA RIITDPLRLL AYGTDASFYR LVPKIVINVE NEAEVARILR
LAYKSRIPVT FRAAGTSLSG QAVTDSVLIR LGEGWQGCRV YDQARRIDLE PGIIGAHANR
TLAPFGKKIG PDPASIDSCK IGGILANNAS GMCCGVAENS YQTLEELRLI LVDGTVLDTG
DDESKRRFRE KHPEIVEGLA DLRRQVISAP ELEARIRHKF KIKNTTGYSL NALVDFEDPF
DILKHLLVGS EGTLAFISKV TYRTVTEHAH KASALMLFPD IRTACEATII LKKQPVAAVE
LMDRPALRSV QDKDGMPPYL RELCDTAAAL LVETRAGDKA ELDAQIETIK AALAGVNMVR
EIEFTPVPQE FAKLWNIRKG LFPAVGSVRA TGTTVIIEDV AFPIERLADA TLELQGLLDT
YGYSEAIIFG HALEGNLHFV FTQDFGDPKE IERYSKLMDD VTVMVVEKYD GSLKAEHGTG
RNMAPFVEME WGQDAYRLMQ DIKRIFDPLT LLNPGVILNP DPKAHLKDLK PLPAAHELVD
KCIECGFCEP ICPSKHITLS PRQRITSWRE IQRLQGKPEH KTELAKLLKA YGYQGDGTCA
TDGLCGTRCP VGIDTGKMTK ALRAESATIR QKKAADWIGE HFAGVARTVS GVLQAVDAVH
AVAGTKFMDV SSETLHRMTG KRVPRWNAQM PGGISRIRRE KVNEGNPLKV VYFPSCIARN
MGPSRCEKIR PLPETTVSVL RKAGYEVIFP ENMAALCCGQ AFESKGFVAQ ADVKSAQLEE
ALLTASRNGA LPVLCDTSPC LKRMQEVLDP RLKIYDPSVF VLEFLQDKLT FTKKDKRVAL
HVTCTSRKLG LEGKLLELAK KCAAKVVVPE DIFCCGFAGD KGFSVPELNA SALKTLAEKV
EDCTEGYSTS RTCEIGLALH GGIPYRNILY LVDECTA
|
|---|
| |