| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2176 |
|---|
| Symbol | |
|---|
| ID | 8377851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 2492066 |
|---|
| End bp | 2493064 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645001399 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_003158676 |
|---|
| Protein GI | 256829948 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA ATCTACGCAA CAAGAGTCTG CTGGCCCTGA AGGATTTCTC TCCAAGGGAA
ATCCGCTTTT TGCTCAGCCT GGCCAAGGAG TTGAAACACT CCAAATATGC CGGCAACGAA
ATCCCTCGTC TGAAGGGCAA AAACATTGTT CTCATTTTCG AAAAATCTTC GACACGCACG
CGCTGCTCTT TCGAAGTGGC GGTGCACGAT CAGGGGGGGC ATGTCACCTA CCTTGATTCG
GCCGGTTCCC AATTGGGGCA CAAGGAGTCG CTCAAGGATA CGGCCAGGGT TCTGGGTCGG
CTGTATGACG GGATCGAGTA CCGGGGATAC GATCAGACCG CTGTCGAAGA CCTGGCCCGC
CATTCTCACG TGCCGGTCTG GAACGGCCTG ACCGATGAGT CGCACCCCAC TCAGGTCCTG
GCCGACCTGA TGACCATGGA GGAGTTCGGG GACAGGCCGC TGCATGAAAT GTCCTTTTGC
TATCTGGGGG ATGCCCGCTT CAACATGGGC TGCTCCCTGC TGGTCGGCGG AGTGCAGATG
GGCATGGACG TTCGTATTGC CGCGCCAGAC GGATTTCAGC CACCGCCGCC GCTCGTGGAT
GAGATGCGCG CCCTTGCGCA GACCACCGGA GCACGCATCA CCATCGAAAC CGATCCTCTG
AAAGCCGTCG CGGGCGCGGA TTTTCTCTAT ACGGACGTCT GGGTTTCGAT GGGAGAGCCG
GACGACGTAT GGAAAGAGCG TCTTGAGCTG CTGCTGCCCT ATCAAATTAA CACCGGCCTG
ATGCAGGCAA CGGGCAAACC GCACACGCGG TTCATGCATT GCCTGCCCGC GTTCCACAAT
CTCGAAACCG AAGTCGGCCG CGAAGTGCAC GAAAAATATG GCCTGAGCGA ACTCGAAGTG
ACCGATGACG TGTTCGAGTC CGAAGCCTCC ATCGTCTTCA CCCAGGCCGA AAACCGGATG
CACACCATCA AGGCCGTGCT CGTGGCCACC CTCGCATGA
|
|---|
| Protein sequence | MSFNLRNKSL LALKDFSPRE IRFLLSLAKE LKHSKYAGNE IPRLKGKNIV LIFEKSSTRT
RCSFEVAVHD QGGHVTYLDS AGSQLGHKES LKDTARVLGR LYDGIEYRGY DQTAVEDLAR
HSHVPVWNGL TDESHPTQVL ADLMTMEEFG DRPLHEMSFC YLGDARFNMG CSLLVGGVQM
GMDVRIAAPD GFQPPPPLVD EMRALAQTTG ARITIETDPL KAVAGADFLY TDVWVSMGEP
DDVWKERLEL LLPYQINTGL MQATGKPHTR FMHCLPAFHN LETEVGREVH EKYGLSELEV
TDDVFESEAS IVFTQAENRM HTIKAVLVAT LA
|
|---|
| |