Gene Dbac_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2162 
Symbol 
ID8377837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2479137 
End bp2481776 
Gene Length2640 bp 
Protein Length879 aa 
Translation table11 
GC content57% 
IMG OID645001385 
ProductMCP methyltransferase/methylesterase, CheR/CheB 
Protein accessionYP_003158662 
Protein GI256829934 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAA AATCCAAGCA AAAAGGCTCG CCACCCCTGA GCCACGAATC CGTACCGCCA 
GCGCACGAAT CTGCGGGACC CCCTATACCC ATTGTCGGAG TTGGAGCTTC CGCCGGTGGA
TTGGAAGCCC TGGAGCAATT TTTAGGGCAC GTGCCTGAAA AAAGCGGAAT GGCCTTTGTC
ATCGTCCAGC ACCTCGATCC GACGCGCAAG GGCCTCCTGC CGGAACTGCT GCAGCGCGCC
ACCGCGATGC CGGTGCATCA GGTCAGGGAC AGGATGCCGG TCGAGGCGGA CTGCGTGTAC
GTAATCCCGC CCAACCATGA CATGTCCATC CTGCATGGCG TGCTGCATCT GTTCAAACCG
GCCGCGCCTC GCGGCCTGCG CCTGCCCATC GACTTTTTCT TCCGCTCGCT GGCAGAGGAC
CAGCAGGAGC GAAGCATCGG CGTCATCCTG TCCGGCATGG GCTCCGATGG CACGCTCGGG
CTGCGGGCCA TCAAGGAAAA GGCGGGGCTG GCCCTGGCGC AGGACCCCGC CTCGGCCAAA
TTCGACAGCA TGCCCAGAAA CGTCATCAAT GCCGGGCTGG CCGATCTGGT CGCTCCGGTG
GAAGAATTGC CCGCAAAGCT GCTCGACCTG ATGCGCCATG CACGGGTTGT CACCGCGTTT
GTCCCCTCGC TTGAGGAAAA AACCCAAAGC GGCCTCGAAA AAATCGTCCT CCTGCTGCGC
ACGAAGACCG GCCATGACTT TTCCCAGTAC AAGAAGAACA CCTTGTACCG TCGCATCGAA
CGGCGCATGA GCATTCACCA GATCGACGGG ATCATGTCCT ATGTCCGCTT TCTGCAGGAA
AATTCCCAGG AAACCGAGAT TCTGTTCAGG GAGCTTCTGA TCGGAGTGAC CAGCTTTTTT
CGCGATCCGG CGACATGGGA GCATCTGCAA AAAAACGCTC TCCCGCTTCT GCTGAAGTCG
TGTCCGCCGA ATGGCATTCT GCGGGCCTGG ACACCGGGCT GCTCCACAGG GGAGGAAGCC
TATTCGCTGG CCATGGTCTT CAGGGAGACC GTGGCTCACG TGGCGCCGGA GTCGGGCATC
AAGCTGCGCA TCTTTGCCAC GGACCTGGAC AAGGACGCCA TCGACAAGGC CCGCCGCGGC
CTCTATCCGC CAAATATCGC TGCGGATGTT TCCGCCGAAC GGCTGGATCA ATTTTTCGTT
CATGACGAAC ACGGTTATCG CGTCGGCAAA GATATCCGGG AAATGATCAC CTTCGCCACG
CAGAATGTCA TCATGGACGC CCCGTTCACC AGGCTTGATA TCCTCATCTG CCGCAATCTC
CTGATCTATC TTGCGCCGGA GTTGCAGCAG AAGCTGCTGT CACTTTTTCA TTACAGTCTG
AATCCGGATG GAGTCCTGTT TTTGGGAAGT TCGGAATCGA TCAACTCCAG CACCGATCTC
TTTGCTCCGA TAGACAGCAA ATCAAGGCTG TTTAGACGAC GCGAATCAAT CCCGACGGCC
GCAAAGATTG CATTCCAGCC TTCATTCGTC CCGGTCTTGC CGGGCATTTC ACAGGAGACC
ACAATGCTCA AACCGGCGGT CAATATCCAG TCTCTGGCGG ATCAGGTGCT GTTGCAGCAC
TTTTCACCGC CCGCCGTGCT GGTCAACAGC AAGGGGGATA TCCTCTACAT CAGCGGCAGG
ACGGGCAAAT ACCTTGAACC GCCGGCGGGC AAGGTCAATT GGAATATCCA CGCCATGGCT
CGGGAAGGAC TGCGCTTCGA CCTGGGGGTC GCCTTTCAAA ATGCCCTGAG GCAGAAGAAG
GCGGTCACGG TCAAGGGACT CAAAGTCACA GAAGGTGAAA CGGTTCAGAC CGTGGACCTC
ACCGTGCAGG AAATTCAGGA ACCTGCGGCC CTGCGCGGCA TGGTCATGGT CATCTTCACC
GACGTGGCGA CCCCTCCAAA ACAAAAAAAA GCACGCCGTT CAAAACCTGG CGATGCAGGA
AGCGTTAAGG TCACGGAGCT GGAACAGGAG CTGTATCAAT GCCGCGAAGA ACTTCGGACC
ACACGCGAAG AAATGCAGGC TTCACAGGAA GAACTCAAAT CCTACAACGA AGAGATGCAG
TCTACAAACG AGGAACTGCA GTCTACAAAT GAGGAATTGA CCACCTCTCG TGAAGAGATG
CAATCACTCA ATGAGGAGCT GCAGACGGTG AACGCCGAGC AGCAATCAAA GATGGACGAG
CTCGCGCGGA TCAATGACGA CATGCGCAAC CTGCTCAACA GCACGGAGAT CGTCACGATT
TTTCTCGACA ACGACCTGCA CGTCCGGCGC TTCACTCCCG GCGCCAACAA GATCTTCAAG
CTCATCCCCG GCGATGTGGG CCGGCCCCTC TCCGATCTTG CCAGCGACCT GCTCTATCCC
GAAATATCCG AGCAGGCGGC AGAGGTGCTC AGAACCCTGG CATTTTCGGA AAAACAGGTT
TGCACCGCCG ACGGTCGCTG GTATGTGGTG CGCATCATGC CCTACAGAAC CATGCAAGAC
ATTATCGCAG GCCTGGTCAT GACCTTCACG AACATCACCG TGGCCAAGGA GCTCGAAAGG
AAACTGCGCG CAGAGAATGA CGAGCTCAGG CTTCGGCTCG GCGCAGGAGG ATCATCATGA
 
Protein sequence
MNSKSKQKGS PPLSHESVPP AHESAGPPIP IVGVGASAGG LEALEQFLGH VPEKSGMAFV 
IVQHLDPTRK GLLPELLQRA TAMPVHQVRD RMPVEADCVY VIPPNHDMSI LHGVLHLFKP
AAPRGLRLPI DFFFRSLAED QQERSIGVIL SGMGSDGTLG LRAIKEKAGL ALAQDPASAK
FDSMPRNVIN AGLADLVAPV EELPAKLLDL MRHARVVTAF VPSLEEKTQS GLEKIVLLLR
TKTGHDFSQY KKNTLYRRIE RRMSIHQIDG IMSYVRFLQE NSQETEILFR ELLIGVTSFF
RDPATWEHLQ KNALPLLLKS CPPNGILRAW TPGCSTGEEA YSLAMVFRET VAHVAPESGI
KLRIFATDLD KDAIDKARRG LYPPNIAADV SAERLDQFFV HDEHGYRVGK DIREMITFAT
QNVIMDAPFT RLDILICRNL LIYLAPELQQ KLLSLFHYSL NPDGVLFLGS SESINSSTDL
FAPIDSKSRL FRRRESIPTA AKIAFQPSFV PVLPGISQET TMLKPAVNIQ SLADQVLLQH
FSPPAVLVNS KGDILYISGR TGKYLEPPAG KVNWNIHAMA REGLRFDLGV AFQNALRQKK
AVTVKGLKVT EGETVQTVDL TVQEIQEPAA LRGMVMVIFT DVATPPKQKK ARRSKPGDAG
SVKVTELEQE LYQCREELRT TREEMQASQE ELKSYNEEMQ STNEELQSTN EELTTSREEM
QSLNEELQTV NAEQQSKMDE LARINDDMRN LLNSTEIVTI FLDNDLHVRR FTPGANKIFK
LIPGDVGRPL SDLASDLLYP EISEQAAEVL RTLAFSEKQV CTADGRWYVV RIMPYRTMQD
IIAGLVMTFT NITVAKELER KLRAENDELR LRLGAGGSS