Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2006 |
Symbol | |
ID | 8377681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 2306554 |
End bp | 2307906 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645001232 |
Product | putrescine--2-oxoglutarate aminotransferase |
Protein accession | YP_003158509 |
Protein GI | 256829781 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR03372] putrescine aminotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATCGCG ACATCTCAAA GGCCCGGGCT GAAGCCCGTT TCATGCTCGA AGCCATCCAC ACCCCCGACG ACCAGCTGAC CCTGGAGCAA AGGCAGGACA TCGCCAGGAA GACCGTCGAG AACTTCCGGG ACAACATCAA CAAGGGCTTT CTGAGCTACC GAAAATCCGT GACCCAGGCC GAGGATTTCG CCTACACCGA ATGGCAGGGC CAGGGTTCGG TCATGCGCGA CGTGCTGGGC CGGGAATTCA TCGACATTCT CGGCGGTTTC GGCCTCTACA GCCCCGGCAT CCGCCACCCC AAGATCGTGG CCGCCGTCAA GGCCCAGCTC GACCGCTCCC CGCAATACAG CCAGGAAATG CTCGACCCCC TGCGCGCCCA GCTGGCAAGG GTCATCGCGC TTTTGACCCC CGGAGATATC CAGAACGGAT TTTTTGCCAA CAGCGGCACC GAGGCCGTGG ACGGGGCCAT GAAGCTGGCC AAGATGTACA CGGGCAAAGC CGGTTTCATC TCCACCTTGA AGGGCTTTCA CGGCAAGTCC CTGGGCGCGC TCTCGCTCCT GGGCAAGGCC GTGTACCGCG AACCGGCCAT GCCGCTCCTG GAGAGCGTGA TCCACGTGGA ATTCGGCGAC GCCGAGCAGG TCGAGCGCGC CCTGTCCATC GCCCGGGCCG TGGGCCAGGG GGTGGCCGCC GTGGTGGCCG AGCCCATCCA GGGCGAAGCC GGGGCCGTGG TGCCGCCGGA CGACTACTGG CCGCGCCTGC GCGAGATCTG CGACCACTAC GGCGTGCTGC TCATCGCCGA CGAGGTCCAG ACGGGCTTCG GCCGCACGGG CACGATCTTC GGCGTGGACC ACTGGGACGT GACCCCGGAC ATCATGTGCT TCGGCAAGGC TCTCGGCGGC GGCGTGGTGG CCATGAGCGC CTTCTTCGCC AAGGCCAGGA TCTGGGAATG CCTGACTCCC AACCCCTTCA TGCACACCAC GACCACGGGG GGGAACCCGC TGGCCTGCGC GGCGGCCCTC GCCCACATCG AGGTCATGCT CGATGAGGAC ACCCCCGGCC AGGCTCGGGA CAAGGGCGCG TACGTCATGG GCAAGCTCAG CGAACTCAAG GGACTCTACC CCGGCATATT GGAGAGCATC ACGGGCAAGG GCCTGCTGAT CGGCATGAAC TTCGTGGACG ACGAGATCGG CTACAAGGTC GCGGCAGGAC TCTTCGCCCG CCGGGTGCTG ACCGCCGGGA CGCTGACCAA CGCGAAGGTC ATCCGTTTCG AACCGGCCCT GACCATTTCC TATGAGCAGA TCGATGAAGT CTTGAACCGA CTGGAAGACA CCTTCAAAAG CATCGCCGTG TAA
|
Protein sequence | MHRDISKARA EARFMLEAIH TPDDQLTLEQ RQDIARKTVE NFRDNINKGF LSYRKSVTQA EDFAYTEWQG QGSVMRDVLG REFIDILGGF GLYSPGIRHP KIVAAVKAQL DRSPQYSQEM LDPLRAQLAR VIALLTPGDI QNGFFANSGT EAVDGAMKLA KMYTGKAGFI STLKGFHGKS LGALSLLGKA VYREPAMPLL ESVIHVEFGD AEQVERALSI ARAVGQGVAA VVAEPIQGEA GAVVPPDDYW PRLREICDHY GVLLIADEVQ TGFGRTGTIF GVDHWDVTPD IMCFGKALGG GVVAMSAFFA KARIWECLTP NPFMHTTTTG GNPLACAAAL AHIEVMLDED TPGQARDKGA YVMGKLSELK GLYPGILESI TGKGLLIGMN FVDDEIGYKV AAGLFARRVL TAGTLTNAKV IRFEPALTIS YEQIDEVLNR LEDTFKSIAV
|
| |