Gene Dbac_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1966 
Symbol 
ID8377639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2260064 
End bp2261245 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content61% 
IMG OID645001191 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_003158470 
Protein GI256829742 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA TAGGAACCCC GCTCTCCCCT TCAGCCACCA AGGTCCTTCT GCTCGGCTCC 
GGCGAATTGG GCAAGGAGGT CGTCATTGAA CTGCAGCGAC TTGGCGTGGA AGTCATCGCC
GTGGACCGAT ACGAAAATGC CCCGGCCATG CAGGTTGCGC ATCGCAGCCA CACCGTTTCA
ATGCTGGACG GCCCTGCTCT GCGCAGGATC ATTGAGACTG AAAAACCGAA TTTCATCGTC
CCCGAAATCG AAGCCATCGC CACCGACACC CTGGTGGAAC TTGAAGCCGA AGGGTACACC
GTCATCCCTA CCGCCCGCGC CGCAAAACTG ACCATGAACC GCGAAGGCAT CCGGCGCCTG
GCCGCCGAGG AACTGGGCCT TCGGACTTCG CCCTACCGCT TTGCCGCGAC CTACGAAGAA
TACATGGACG CCATCCAGAC CGTGGGCACC CCTTGCGTGG TCAAACCCAT CATGAGCTCC
TCCGGCAAAG GGCAATCTGT GGTCAAGGCT CCCGCCGATG CCGAGAATTC CTGGAAATAT
GCCCAGGAAG GCGGCCGCAC GGGCAAGGGC AAGGTCATCG TCGAAGGATT TGTCGACTTC
GATTACGAGA TCACCCTGCT CACCGTGCGC CACACCGGAG GAACATCATT CTGCGCCCCC
ATCGGCCATT TCCAGAAAGA TGGAGACTAC CAGCAATCCT GGCAGCCTCA ACCCATGAGC
GAGGCGGCCT TGGCCGAGGC CAAACGCATG GCCGAGGCAG TGACCGGAGC CCTGGGCGGA
CGCGGGATTT TCGGCGTGGA ATTCTTCATC AAGGGCGACA CCGTCTATTT CAGCGAGGTT
TCCCCCCGCC CTCACGACAC TGGGCTGGTC ACGCTTATCT CCCAGGATCT CTCGGAATTC
GCCCTGCACG CCCGCGCCAT CCTCGGACTG CCCGTACCGG TCATCCGCCA GCTCGGACCC
GCCGCCTCCA GTGTCATCAT GGCCGAAGGA TCTTCGAATA GCGTGTCGTT CGGCAATCTT
GAAGCCGCGC TGTCCGAGCC GGACACGGAC GTAAGGCTGT TTGGCAAACC CGAAGTTTCC
GGTAAGCGGC GCATGGGCGT GCTCGTCGCC CGCGACGAAA GCCTGGAAAA GGCCCTGGAA
AAAGCCAAAA AAGCCGCCAA GGCGGTGACG ATCACACTCT GA
 
Protein sequence
MTQIGTPLSP SATKVLLLGS GELGKEVVIE LQRLGVEVIA VDRYENAPAM QVAHRSHTVS 
MLDGPALRRI IETEKPNFIV PEIEAIATDT LVELEAEGYT VIPTARAAKL TMNREGIRRL
AAEELGLRTS PYRFAATYEE YMDAIQTVGT PCVVKPIMSS SGKGQSVVKA PADAENSWKY
AQEGGRTGKG KVIVEGFVDF DYEITLLTVR HTGGTSFCAP IGHFQKDGDY QQSWQPQPMS
EAALAEAKRM AEAVTGALGG RGIFGVEFFI KGDTVYFSEV SPRPHDTGLV TLISQDLSEF
ALHARAILGL PVPVIRQLGP AASSVIMAEG SSNSVSFGNL EAALSEPDTD VRLFGKPEVS
GKRRMGVLVA RDESLEKALE KAKKAAKAVT ITL