| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1954 |
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| Symbol | |
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| ID | 8377627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2249280 |
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| End bp | 2250293 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645001179 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_003158458 |
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| Protein GI | 256829730 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.355281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATG GGACCCACAC TCAAGACCGC CGTGATTTTC TGAAAAAACT GGCTGTGCTC
GCCGGTGGAG CAGCACTGGC TCCTGCGTTG CGCGTGCTTC CGGCCATGGC TGCGAGCGGC
TTGGTCATGA CCACCGAAAA GCGCATGCTC ATGGGAACGA TTGTCGGCAT GACCGTCATG
GCCCCAAGTA AGAATCAGGG TCAAGAAGCC ATTGGCCGCG CTTTTGATGA AATGAATCGT
TTGATCGGCA TTTTGAGCCG ATTTGATTCC AATACCGCCT TGTCCGCCCT GAATGTTCAC
GGACGCCTTT CCGGATCTCC GCGGGAACTG CTGGACGTCC TGGCTCACGG AAGCACGCTG
CACCGTCAAT CCGGTGGACG CTTCGACATG ACTGTGGCAC CTGTTGTCAA CCTCATGGAA
CGCACCAAGG GGCAGCCTGA CGCAAAGGAA CTTCAAGAGG CCCTGGCTCT GGTTGATTCC
ACCCAAGTGC GGCAGAGCGG ATCGGATTTG AAGTTCACCA CATCCGGGAT GAGCGCGACT
CTTGACGGAA TAGCCAAAGG ATACATTGCC GACAAAGCGG CAGAAATGCT GGGCGCGCTC
GGAGTTGCTC ATTACATGGT CGATGCCGGC GGAGACATTC GCGTCCAGGG CTCGCCCAAA
GGTGACGGTC GTCCGTGGCG CATTGCCATC GAAGATCCAA ACAAGCAGGG CGATTATCCT
GCCGTCATCG AAATGCGTTC GGGCGCCGTG GCAACATCCG GCGGTTATGA AGTCTTTTTT
GATTCTTCCC GCAAATCGAC TCACCTGATC AACCCCGAGA CCGGCGCTTC CCCGCAGTAC
ATCAGAAGCG TGAGCGTCCA GGCTCCCACG GTTATGCAGG CTGACGGCCT GGCCACGTCG
CTGAGTCTCA TGTCACCGCG CGAGGCTTTG CGTCTGACCT CATCGCTGCC CGGTCATTCC
TGTCTGCTGG TGACCTCCTC CGGTGCGCGC CTTGCTTCTC CTTTATGGAG CTAA
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| Protein sequence | MKHGTHTQDR RDFLKKLAVL AGGAALAPAL RVLPAMAASG LVMTTEKRML MGTIVGMTVM
APSKNQGQEA IGRAFDEMNR LIGILSRFDS NTALSALNVH GRLSGSPREL LDVLAHGSTL
HRQSGGRFDM TVAPVVNLME RTKGQPDAKE LQEALALVDS TQVRQSGSDL KFTTSGMSAT
LDGIAKGYIA DKAAEMLGAL GVAHYMVDAG GDIRVQGSPK GDGRPWRIAI EDPNKQGDYP
AVIEMRSGAV ATSGGYEVFF DSSRKSTHLI NPETGASPQY IRSVSVQAPT VMQADGLATS
LSLMSPREAL RLTSSLPGHS CLLVTSSGAR LASPLWS
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