Gene Dbac_1953 details

Gene Information

• Locus tag: Dbac_1953
• ID: 8377626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: -
• Start bp: 2247012
• End bp: 2249060
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 645001178
• Product: AsmA family protein
• Protein accession: YP_003158457
• Protein GI: 256829729
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2982] Uncharacterized protein involved in outer membrane biogenesis

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.279291
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATAC GGATCTGGAC TGTGCGCGTT TTGCTGGGGT TGGTCGTGGT TTGCGGAATT 
CTGGCCGGAG TGCTGCTGCT GAACTTCGAT CCCAACGATT ACAAATCCCA GATCGTCAAA 
TCCGTGCGCG ATAACACCGG GCGCGAGTTG CTCATTTCCG GGGATATCGG CCTGGAATTT 
TTCCCGTACC TGTCCGTTTC CATCAGTGAT CTTGAGCTTG GGAACTGCCA AGGTTTCAGC 
GGGCCCTTTT TGACCCTGAG CGGAGCGCAC TTAAAAACCC GCCTCTTGCC TCTTCTCTCT 
TCACGGTTGG ACGTCGTGGC TATCGATATT GAGGGACTTT CCCTGTTTCT TTCGCGAGAT 
GAGAGTGGAC GCGGTAATTG GATGGATCTT GCCACTCCTC CTTCGGATGA TGCAAGTGCT 
CCAGATAAAC CTGTTTTGGC CCGGGATAAA CGAGTACCGT TTCTGGCGGG GCTGATTGTG 
GACGGACTGC ACGTTTCGGA TGCCCGGATT GTCTGGGACG ACCAGCGCAG TGGTGAGAAT 
TTCGAGGTCG CCGGCATTCG TCTGGACGTG TCCGATTTTG CTTTCGGCGT GCCTTTTGTG 
GTGGATACCT ATGCACGGGC AAAGCGGGGT GAGATCACCG CAGAACTTGA TTTTTCCGCC 
AAAGCGACTC TGGACCTTGA TCGTTTGGGC GTCGAGGATC TGGCCATGAA GGCCATTTTG 
TCCGGAGATT CTCTGCCGGG CAGCCCTGAG ACCATATCTC TTTCGGCAGA TTTTTTTTCT 
ACTGACGGCC GGATCGACAA TGGACGAATG CAGGGCTTGG GGCTTGATGT CGGTTTTTCG 
GCACAGGCAT CGAGCGGTAC CGACATCAAT GGCGTTCTTG ATGTGGCACG CTTCAATCCA 
AAGGATGCAT TTACCCGGCT TGGGTTGGCC TTTCCTGATT TTAAGGACCC ATCCGCTCTG 
GAAGAGGTGG CCTTTTCATG TACATTGACC AAAGGACAGG ATGGTTTTGC GGCGACGAAT 
TTGCGGCTCG TGATCGACGA TCAAGCGCTT AGAGGCCGTG TCGCCGTCCA TGGCCGCACA 
AATCCGCAGG TTGACCTCGA TCTGCACCTC GATACCTTGA ATCTGGACCG TTACCGCATG 
CATTCCGATC CCGGCGAGGC ACAGGCTTCC TCCGGATCTT CGGACGAAAA CATCGAATTG 
CCGGTCAAGA TGATGCGCAA ACTGAATCTG AACGCGACGT TGGCAGTGGA TTCACTTACC 
GTGTACAATC TGCGTGTATC CGACGCACGC ATTCGCCTGA CGGCCAAAGA CGGTCTGTTC 
GACATGCAGG AAATCGAATC AGGTCTTTAC GGCGGGCAGT TGAAGGGCGA GGGATCCCTG 
GATGTGCGTG GGCAGACACT TGTGTATACG TGGTCCCATC TCGTCTCAGG TTTGCAGATT 
GGGCCGTTGC TGCGTGATCT GCATGGCCAG GAAAGCCTTT CGGGTTCGAT GCAAAGCAGC 
GCCGCCATCG ATACGAGCGG GTGGAGCACA ATGGATTTGC GGCGCAATCT GAAGGGGAAA 
GTGGATTTCA AAGTGACTGA CGGTGCCATA AGCGGGGTGA ACGTTTCGCA GTTGCTGCGT 
GATGGAATCC GCAAAGTGAA AGGCCTCTCC CCGGGACCGC AAGAATCGCC TCGCACGGTC 
TTTTCCGTCC TTTCAGCCAG CGGGAGCATC AGCAACGGGG TGGAGACGAC GCCCGATCTT 
TTCCTTCTTG CGCCACGCTT CCGCGTCACC GGAAACGGTC AGACGGATCT GGTGCGCGAG 
GTCATGGATT TCAGTCTGCT GATCGAGCTT GCCGGGAGTC AGGGTCAATT CGATGAAGGC 
GCGCTTGGCT TGAACAGCAT TCCGGTGCGG ATCAGCGGTC CGGTGCGCGA GCCGACCATC 
AGCCCCGACA TGGAAGCTGT TTTGCGGGCC TTGGGTTTGC GCGGCGGTCA GGCCGTGCAG 
GATGTTTTGA AAGGCGTGGG CTCGGGCCTG AACAAGGGCG TGGAGGGCTT GAAGAACCTC 
TTCAAATAA 

 

Protein sequence

MNIRIWTVRV LLGLVVVCGI LAGVLLLNFD PNDYKSQIVK SVRDNTGREL LISGDIGLEF 
FPYLSVSISD LELGNCQGFS GPFLTLSGAH LKTRLLPLLS SRLDVVAIDI EGLSLFLSRD 
ESGRGNWMDL ATPPSDDASA PDKPVLARDK RVPFLAGLIV DGLHVSDARI VWDDQRSGEN 
FEVAGIRLDV SDFAFGVPFV VDTYARAKRG EITAELDFSA KATLDLDRLG VEDLAMKAIL 
SGDSLPGSPE TISLSADFFS TDGRIDNGRM QGLGLDVGFS AQASSGTDIN GVLDVARFNP 
KDAFTRLGLA FPDFKDPSAL EEVAFSCTLT KGQDGFAATN LRLVIDDQAL RGRVAVHGRT 
NPQVDLDLHL DTLNLDRYRM HSDPGEAQAS SGSSDENIEL PVKMMRKLNL NATLAVDSLT 
VYNLRVSDAR IRLTAKDGLF DMQEIESGLY GGQLKGEGSL DVRGQTLVYT WSHLVSGLQI 
GPLLRDLHGQ ESLSGSMQSS AAIDTSGWST MDLRRNLKGK VDFKVTDGAI SGVNVSQLLR 
DGIRKVKGLS PGPQESPRTV FSVLSASGSI SNGVETTPDL FLLAPRFRVT GNGQTDLVRE 
VMDFSLLIEL AGSQGQFDEG ALGLNSIPVR ISGPVREPTI SPDMEAVLRA LGLRGGQAVQ 
DVLKGVGSGL NKGVEGLKNL FK