Gene Dbac_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1923 
Symbol 
ID8377595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2215570 
End bp2216274 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID645001150 
ProductABC transporter related 
Protein accessionYP_003158429 
Protein GI256829701 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGGAA TACTCATCGA AGACGTGCGC AAGCGCTATG GCCAAGGCGA CACGGCGGTG 
GACGCCCTGA AGGGGGTGGA CATGGTCGTG GGGCCGGGAG AAGTGGTCGG TCTCATCGGC
CCGTCAGGTT CAGGCAAGAG CACGCTGCTC AAGTGCCTGG GAGCGGTCAT CGAGCCGAGC
GGCGGGAGGA TGACGCTGGG GGATGACATC ATTTTCGATC AGGGCTGGAA GATTTCCGAT
TTGCGGGCGC TTCGGCGCGA CAAGATTGGG TTTATCTTTC AAGCGCCCTA CCTCATTCCT
TTTTTGGACG TTACGGACAA CGTGGCCTTG CTGCCGATGC TGTCCGGCAT GCCGAATTCC
AAGGCCAGGG CCTTGGCTCT GGAATTTCTC GAAGCTCTGG ACGTCGGGCA CAGGGCGGGG
GCTATGCCTG CCCAGCTTTC GGGAGGGGAG CAGCAGCGTG TGTCCATTGC CCGCGCCCTC
GTCAATCGGC CGCCAGTCAT TCTGGCCGAC GAGCCGACCG CGCCCCTGGA CAGCGAAAGG
GCCATGGCCG TGATCCGGAT TCTGAACCAG ATGGCCAGCC AGTATGAAAC CGCGATCATT
GTCGTGACCC ATGATGAAAA AATCATTCCG ACCTTCAAGC GCCTGTACCA GATTCGGGAC
GGGCGCACCG AGGAACAGGC CGGTGAAGGG CGGTCCGTGG AGTGA
 
Protein sequence
MPGILIEDVR KRYGQGDTAV DALKGVDMVV GPGEVVGLIG PSGSGKSTLL KCLGAVIEPS 
GGRMTLGDDI IFDQGWKISD LRALRRDKIG FIFQAPYLIP FLDVTDNVAL LPMLSGMPNS
KARALALEFL EALDVGHRAG AMPAQLSGGE QQRVSIARAL VNRPPVILAD EPTAPLDSER
AMAVIRILNQ MASQYETAII VVTHDEKIIP TFKRLYQIRD GRTEEQAGEG RSVE