| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1904 |
|---|
| Symbol | |
|---|
| ID | 8377576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2195475 |
|---|
| End bp | 2196776 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645001132 |
|---|
| Product | permease |
|---|
| Protein accession | YP_003158411 |
|---|
| Protein GI | 256829683 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.560761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGA AAGAAGAGTG GAAGCCGTTG GGCTTGATCG TCGTCGTATT CCTGGCCTGT
TTTTATCTGC CCGTCGGTTT GCCGCGTTTT GACAACGCCA TCCTCGAAGC GTTTCATCTC
GTCAAATGGT ACGCAAGAGA GCACGTTCTT TTGTGTCTGA TCCCGGCCTT CTTCATCGCC
GGGGCCATTT CGGTCTTTGT CAGCCAGGGG GCGGTGATGA AGTACCTGGG AGCCAAGGCC
AACAAGGTTC TGGCCTACGG CGTGGCCGCC GTCTCGGGCA CCATCTTGGC CGTATGCTCC
TGCACAGTGC TGCCGCTCTT CGCCGGCATC TACCGCATGG GCGCGGGCCT TGGCCCGGCT
TGCGCGTTTC TCTATTCCGG TCCGGCCATC AACGTGCTGG CCATTGTCAT GACGGCCCGC
ATCCTCGGGC CAGAAATGGG CATCGCCCGC GCCGTGGGAG CCATCCTGTT CAGCGTGGTC
ATCGGCCTTT TGATGCACTT TTTCTTCCGC AAAGAGGAGG CCGAGCGGCA GGTCATGCAG
ATGGCCATGT TGGAAGAGGA AGTGAAACGC CCCCTGTGGC AGAACGCCCT CTATTTCGCT
TCCATGGTAG CCATCCTGGT TTTTGCCAAC TGGGGCGCTC CGCAGGCCGA TACCGGGCTG
TGGGCTGCCA TCTATAATGC CAAGTGGATG CTGACTTCGG CCTTTTCCGT GGCTCTGGGC
GCTATGCTCG TGACCTGGTT TGGCGTAAAG GTTTGGAAGG TCGGCGTTGC GGCCGTTCCC
GTCGTTCTGC TTGCGCTTGT TTTTCCGCAG CAGCCACTGC TGGCCTTCAC GGCCGGCGTC
ATCGGCCTGT CCGCCTTCAC CAGCACAGAT GACGGAGAGG TCGGGGATTG GTTTTCGTCA
TCCTGGGGTT TTGCCAAGCA GATCCTGCCG CTTCTACTCT TCGGCGTGCT CGTCGCCGGG
GCGCTGCTGG GCCGCGTGGG CAACGAAGGC CTCATCCCCT CGGAATGGGT AGCCGGGGCT
GTGGGCGGCA ATTCATTCAT GGCCAACTTC TTCGCCTCCT TCGCCGGTGC CTTCATGTAC
TTCGCCACCC TGACCGAGGT GCCCATCCTG CAAGGGCTCA TCGGTTCCGG CATGGGCAAG
GGCCCGGCCC TGGCCCTGCT CCTGGCCGGT CCTGCGCTGA GCCTGCCGAA TATGCTGGTC
ATCAATAGCA TCATGGGCCT CAAGAAGACC GTGGTCTTCG TCAGCCTGGT CATCATCATG
GCCACGTTTT CGGGTATTTT TTACGGATCA ATCTGGGGTT GA
|
|---|
| Protein sequence | MNWKEEWKPL GLIVVVFLAC FYLPVGLPRF DNAILEAFHL VKWYAREHVL LCLIPAFFIA
GAISVFVSQG AVMKYLGAKA NKVLAYGVAA VSGTILAVCS CTVLPLFAGI YRMGAGLGPA
CAFLYSGPAI NVLAIVMTAR ILGPEMGIAR AVGAILFSVV IGLLMHFFFR KEEAERQVMQ
MAMLEEEVKR PLWQNALYFA SMVAILVFAN WGAPQADTGL WAAIYNAKWM LTSAFSVALG
AMLVTWFGVK VWKVGVAAVP VVLLALVFPQ QPLLAFTAGV IGLSAFTSTD DGEVGDWFSS
SWGFAKQILP LLLFGVLVAG ALLGRVGNEG LIPSEWVAGA VGGNSFMANF FASFAGAFMY
FATLTEVPIL QGLIGSGMGK GPALALLLAG PALSLPNMLV INSIMGLKKT VVFVSLVIIM
ATFSGIFYGS IWG
|
|---|
| |