Gene Dbac_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1893 
Symbol 
ID8377565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp2186625 
End bp2187302 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID645001121 
ProductABC transporter related 
Protein accessionYP_003158400 
Protein GI256829672 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATT CCATCATAAG AACCCAGGGT CTGACCAAGA CCTATGGCCA GGGCGCAAGC 
CTGACCCAGG CCCTGCGCGG CGTGGACCTT GAAATCGAGC GGGGCGGGCT GACCTGCATC 
GTCGGCCCCT CCGGGCACGG CAAGTCGACC CTCATGCATC TGCTCGGGGG GCTGGACCGG 
CCAAGCAGCG GCCGGGTCCA GCTTGACGGA CAGAACATGT TCGATCTTCG CGACAGTGAG 
CTGGCCGCTT TGCGCTCGCG CAAGATCGGG TTCGTGTTCC AGTTCTTCAA TCTTCTGCAG 
AGCCTCACGG CCCGTGAGAA TGTGGAAATG GCCCTGATGC TGGCCGCTGC GTCCGAAACC 
CGGCAAAAAG AACGGGCCGA GGAGCTGCTG GAACTGGTCG GACTCTCGGA CAAGATAAAT 
GCCAAGCCGG GGCAGCTCTC CGGCGGGCAG CAGCAGCGGG TGGCCATTGC CCGGGCCCTG 
GCCAATGACC CTCCGGTGCT GCTCATGGAC GAACCCACGG GGAACCTGGA CTCGGCGGCG 
GAGGCGGAGG TGCTGAACGT GCTTGAGGAT CTCGTCCGCC AGGGCAAGAC CATCATCCTG 
GTCACGCACA GCGCCGAAAT CGCCGCCCGG GCCGACACCC TTGTGCGGGT GCGGGATGGC 
GTGATCTGTC ATGACTGA
 
Protein sequence
MNDSIIRTQG LTKTYGQGAS LTQALRGVDL EIERGGLTCI VGPSGHGKST LMHLLGGLDR 
PSSGRVQLDG QNMFDLRDSE LAALRSRKIG FVFQFFNLLQ SLTARENVEM ALMLAAASET 
RQKERAEELL ELVGLSDKIN AKPGQLSGGQ QQRVAIARAL ANDPPVLLMD EPTGNLDSAA 
EAEVLNVLED LVRQGKTIIL VTHSAEIAAR ADTLVRVRDG VICHD