| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1874 |
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| Symbol | |
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| ID | 8377546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2133773 |
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| End bp | 2136154 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645001102 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003158381 |
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| Protein GI | 256829653 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATA TGGAAGTGAA AACGGTAGAG GTTCAAGCAG GTATCCAATG CCGGATCAAG
GAGTTGCGTG AACGGACAGC CGTTCGGCCC GGCGATGCTT TGGCCTGGCA GCATCTCGGA
TTCGCCCTGC ATCAATCCCG CGAGTACGAG GAAGCCTTAC GGGCCTTTGA GCAGGCCGTC
TTCCTCAAGG CTTCGGCGCG GGTTCAGGCC TTGCCCTACG CCTTGTCCCT GAGCGCCCTG
CACCGGCACG ACGAGGCCAT TGCCCTGCTT GAGCCCCTGC AGGCCAAGAA ACCAAAGGAT
TTCGACCTGA TCAACCTGCT TGGGGTGATG CTCAAACGTG CCGGTCGCTT CGAGCAGGCC
CTCGGCATGT TCGAGCTGGC GCGGAAACTT CGCCCGCGCC TGGTCTCCGC CTGGGTGAAC
ACGGGTAATG TCCACGAAGC CATGGGCAAT TTCCAGGCGG CGGCAGAGGC GTTCGGGGAA
GCAGCACGCC TGGAGCCGCG CAATGCGGAA TTATGGCGCT TGCAGGGGGC CTCGCTTTTC
CGCCAGCGCC GGACCGAACC CGCCTTGCAG GCTCTGGACA GGGCCGCGAG CCTTGCCCCG
GCCGATCCCG CTTCGTTCAG AACGCATGTT CAGGTGCTGG CAAAGCTGGG CAGGCATGAT
GAAGCCGCCG CAGCCATCGA ACGTTTCCGG GCCGCGCGTC CGGGCGATCC GGAACCCGCG
ATCATGCTCG CCCGAATTCG GTACAATGCC GGTCGCATCG ACGACGCCAG GAAGCTGCTT
GCCGAAGTCC TGGCTGACGA ACCCGGCCAT CTGTCGGCCA ACCTGCTTCT CGCGCAGACC
TGCGGCGACG GGACTGCCGA AGGCAGCCGT CGCATGGCCA ACGACGCCTT GCGGCGCGCC
CTGGCCGCCA ACCCCGATGC ATGGCAGGCC GCCGAAAGGC TCGTCGACAG CCTTTCGCGC
AGCCGCTACG GGAGCGAGGC GGAGCATCTG GAAGCCGCCT ACGCCGTAGC CTGCGACCTG
CAGGACAGGC ACCCCGAGAG ACGGCTTGAG ACCGCACGCA CGCTGCGCAC GGTCTTTACG
CGTTTGCTGG ACATGGAGCG CATGGCGGCC ACCGGCCGGC TCGGCGAGAT TCTGCCGGTC
TGGCAGTCGC AAGGCAAAAT CTCGGCGGTG CATTACGAGC TGGGCCAGGT CCAAAGCATG
GAGGACAGGG CTATGCTCGT GGAGTGGCAC CGGCAGTGGG GACGCGGGGT CATCGGTGGC
GTCACGCCCG TCACGCCTGC GGCCATGCCC ACCATGGCTT CGAAGCGCAA GCTGCGCGTC
GGCTTCATGT CCAGCGACCT GCGCAACCAT CCGGTCGGCT ATTTCGCCTA TCCGTTGCTG
TCACGCTACG ACCGGGACCG GTTCGAAGTC TATTGCTACT CCTTTTACGA GGGGTCGCCC
TCGCCCGCCC AAGCCCAGAT CGAGAGTAAG GTCGCGGCCT ACCGCTGGTG GCCGGGGCGC
ACCAGCGAGC AGGTGGCCGA GGGCATCGCC GTGGACGGTC TCGACATCCT TTTCGAGCTG
GGCGGCTCCA CGGCCATGAA CAAGCTCGAC GTCATGGCCT ACCGTCCGGC CCGCATCGGG
GCGAGCTGGC TGGGCTACCC CCATTCCGCC GGTCTGGAGA CCATCGATTA CATCGTGGTG
GACCCGTACA TCCTCCCGTC CGATCCACGT CTGCTCATCG AGCGGCCCTT CGAGCTGTCC
GAGACCTGGG TTGTGGTGGG GCGCAATAAC TTCGCCGACG TTCCCATCGC GGGCGGGCTT
CCCGAGGATC GGCGCGGCCG CCTGACCTTC GGCACGGCCA ACAATCCCTA CAAGATTACC
GAGGCCTGTC TCGACTGCTG GGCAGCTGTG CTGCGCCGCG TGCCTGGCTC GCATTTCCTC
TTCCTGCGGC CCGAAGCCGC GACGCCGAGC TTCAAGGCCA ACGCGCGGGC GGCCTTCGCG
GCCCGCAACG TCGACCCGGG CCGCCTTGAT TTCATCGGCG TGCGAGGAAC GCACCTGCAG
CACTACAACG AGATCGACAT CGCCCTGGAC ACCCTGCCCC ATGTCGGCGG CACCACGACC
TGCGAAGCCC TGTGGATGGG CGTGCCCACG ATCAGCCTGG TCGGGCCGGG ATTTGCCGAA
CGCCTGTCCT ATTCAAACCT TTCCAACGCC GGACTCGGCG ACCTGGCCGT GTTCAGCACC
GATAATTACG TGGAACAGGC GGCCATGCTG GCCGAGGACC GGACCCGACG ACTGGCCCTG
CGCCACGGTT TGCGCGACAT GATCGCGACC AATCCGCTGG GGCAGGCTGA CCGCTTTGTC
CGGAATTTTT ATCGCAAAAT CGAGGAGGTC GTCCTGTCGT GA
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| Protein sequence | MKDMEVKTVE VQAGIQCRIK ELRERTAVRP GDALAWQHLG FALHQSREYE EALRAFEQAV
FLKASARVQA LPYALSLSAL HRHDEAIALL EPLQAKKPKD FDLINLLGVM LKRAGRFEQA
LGMFELARKL RPRLVSAWVN TGNVHEAMGN FQAAAEAFGE AARLEPRNAE LWRLQGASLF
RQRRTEPALQ ALDRAASLAP ADPASFRTHV QVLAKLGRHD EAAAAIERFR AARPGDPEPA
IMLARIRYNA GRIDDARKLL AEVLADEPGH LSANLLLAQT CGDGTAEGSR RMANDALRRA
LAANPDAWQA AERLVDSLSR SRYGSEAEHL EAAYAVACDL QDRHPERRLE TARTLRTVFT
RLLDMERMAA TGRLGEILPV WQSQGKISAV HYELGQVQSM EDRAMLVEWH RQWGRGVIGG
VTPVTPAAMP TMASKRKLRV GFMSSDLRNH PVGYFAYPLL SRYDRDRFEV YCYSFYEGSP
SPAQAQIESK VAAYRWWPGR TSEQVAEGIA VDGLDILFEL GGSTAMNKLD VMAYRPARIG
ASWLGYPHSA GLETIDYIVV DPYILPSDPR LLIERPFELS ETWVVVGRNN FADVPIAGGL
PEDRRGRLTF GTANNPYKIT EACLDCWAAV LRRVPGSHFL FLRPEAATPS FKANARAAFA
ARNVDPGRLD FIGVRGTHLQ HYNEIDIALD TLPHVGGTTT CEALWMGVPT ISLVGPGFAE
RLSYSNLSNA GLGDLAVFST DNYVEQAAML AEDRTRRLAL RHGLRDMIAT NPLGQADRFV
RNFYRKIEEV VLS
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