Gene Dbac_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1872 
Symbol 
ID8377544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp2131936 
End bp2133009 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content68% 
IMG OID645001100 
ProductCDP-glucose 4,6-dehydratase 
Protein accessionYP_003158379 
Protein GI256829651 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02622] CDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.986998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGCGC TTTCCTCCGG GTTCTGGAGC GGACGTCGCG TGCTGGTCAC GGGCCACACC 
GGATTCAAGG GCGCCTGGCT TTGCCTCATG CTGCATGCCC TCGGCGCGAA AGTGTCGGGG 
ATCTCCCTGC CGCCGGTCCG CCACCGAACC TATGATCTGC TGGGCGTGTC CACCCGGATG 
CGACGTTCCT ATGCGGCCGA CATCCGCGTG CCGGCGCTGG TGGAGAAGAT CACGCAAAAG 
GCGCGTCCCG AGATCGTTTT CCATCTGGCC GCGCAAGCCC TGGTGGGGGA GGGGTATCGC 
GACCCAGGCG GCACCTTCGC CACCAACGTG ACGGGCACGG CGCATCTGCT GCAGGCGCTG 
CGCGGTCAGC GCGACGTCGC GGCGGCGGTG ATCGTCACCT CGGACAAGGT GTATCGCAAC 
GACAACACGG GGCGGCCCTT CCGGGAGGAC GATCCACTGG GCGGCGTTGA TCCCTACAGC 
GCTTCCAAGG CCGCGGCCGA ATCGGCCGTG ACAGTCTGGC GACATTCCTA CATGGACGAG 
ATGCCGCCCA TGGCCACGGC CCGCGCCGGT AACGTCATCG GCGGCGGGGA TTTCGCCCGT 
GAGCGTCTGG TGCCGGATCT GGTGCGAGCC CAGAGAAGGG GTAGCCCTCT TGTGTTGCGG 
AGTCCAGACG CCACGCGCCC ATTCCAGCAT GTGCTGGATG TGCTGCGCGG CTATCTGTTG 
CTGGCCCAGG CCCTGGCCGC AGGTTCCCTT GTGCCGGCGG CCCTCAACTT CGGCCCGCGG 
GACGCCGAGT TGCGGGTGCG GGATCTGATT CATCACTGGG AGGCCGCGAC GGGCCGATCG 
GTGCGCTGGG AAACCACAGG CGCTTCCGTC ATCGCCGAAC AGCGGCGGCT GGCCTTGGAC 
AGCAGCCTCG CGCGGCGCGT TCTGGGATGG ACTCCCTTTC ACGACACGTC AGGCGCCATC 
GCCAGGACCG CGCAGTGGTA TGCCGCCTGG GCCAGAGGCG TGGACATGGG CGTCTACTCG 
GAAGACGAAG TCGGCAAAGC GTTGTCCCCC TCGGCAGCGC AGGAGCAGGC ATGA
 
Protein sequence
MNALSSGFWS GRRVLVTGHT GFKGAWLCLM LHALGAKVSG ISLPPVRHRT YDLLGVSTRM 
RRSYAADIRV PALVEKITQK ARPEIVFHLA AQALVGEGYR DPGGTFATNV TGTAHLLQAL 
RGQRDVAAAV IVTSDKVYRN DNTGRPFRED DPLGGVDPYS ASKAAAESAV TVWRHSYMDE 
MPPMATARAG NVIGGGDFAR ERLVPDLVRA QRRGSPLVLR SPDATRPFQH VLDVLRGYLL 
LAQALAAGSL VPAALNFGPR DAELRVRDLI HHWEAATGRS VRWETTGASV IAEQRRLALD 
SSLARRVLGW TPFHDTSGAI ARTAQWYAAW ARGVDMGVYS EDEVGKALSP SAAQEQA