| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1812 |
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| Symbol | |
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| ID | 8377484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2066387 |
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| End bp | 2067100 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645001040 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003158319 |
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| Protein GI | 256829591 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00264176 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCCC TGCGCGACAA CATCCCCTCC CGGCATCGGT CCTACATGAT GTGGACGCTG
CTGGCCCTGA ACATCGCCTT TTTTCTGGCT GGCCTGGGCC TGAGCAATGC CCAGGAATTC
AGGCTCTTTC ATTTGTTCGG CGTGGTCCCG GCACGCTATT TCGACCCGCA GTGGGCCATA
TTTCAGGGAT ATCCCGAAGG GTTGCTGTTG CCGCTTGGAA CACACATGTT CCTGCATTCC
GGCTGGCTGC ATCTCATCGT CAACATGTGG ACCCTCTGGA TTTTCGGGGA CAACGTGGAG
GACGTGATGG GGCCCTTCAA GTTCCTGGTC TTCTACCTGC TGTGCGGTCT TGGCGCGCTC
GCGGTGCACA TGCTCACCAA TTCCTCTTCC ACCATGCCCG TGGTCGGGGC TTCCGGGGCC
ATCGCCGGGG TCATGGGCGC CTATTTCTTT CTGTATCCGC ACGCCAAGGT GGTTACTTTC
CTGCCTATCC TGATCATTCC CTTCATCTTC GAGCTGCCGG CCGTGTTCTA TCTGGGGGCC
TGGTTCCTGA CGCAGGTCCT TTCCGGGATG CTGGCACCGG CGGGCGGCGG TGGGGTGGCC
TGGTGGGCGC ACATCGGCGG GTTCGTGGTC GGCATGCTGC TGCTGCGTTT TTTCCGGGAT
GATTCCCGCT GCTATTATTG TTACCGTTCC GAAACCTGGA AGGAGTGGAA GTAG
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| Protein sequence | MFPLRDNIPS RHRSYMMWTL LALNIAFFLA GLGLSNAQEF RLFHLFGVVP ARYFDPQWAI
FQGYPEGLLL PLGTHMFLHS GWLHLIVNMW TLWIFGDNVE DVMGPFKFLV FYLLCGLGAL
AVHMLTNSSS TMPVVGASGA IAGVMGAYFF LYPHAKVVTF LPILIIPFIF ELPAVFYLGA
WFLTQVLSGM LAPAGGGGVA WWAHIGGFVV GMLLLRFFRD DSRCYYCYRS ETWKEWK
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