Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1792 |
Symbol | |
ID | 8377464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 2043552 |
End bp | 2045096 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645001020 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003158299 |
Protein GI | 256829571 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0136295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAC TGCTCTTTTT CGCGCTGGCA TTCATCTTTC TGGCCACGGC TGCCCAAGGC AAAACCCTGA AGATGGCCCT CGACGCCGAT CCGGAGTCCA TGGACCCGCA TGTCCAGCTC TCCGGCGGCA TGCTGCAGTA CACCCACCTG TGCTTTGATC CGCTGATCCG CTGGACCAAG GACATGAAAT TCGAGCCCCG CTTGGCCACC AAGTGGGAGC GCATCGATGA CCTGACCGTG CGTTTTTATC TGCGCGAAGG CGTCAAGTTC CACTCCGGCA ACCCCTTCAC CGCCGCCGAC GTGGTCTGGA CCATCGACCG CCTGAAGAAA AGCGAAGATT TCAAAGGCCT CTTCACTTCC TTCGCAACCC CCAAGATCAT CGACGACTAC ACCGTCGACA TCATCACCAC CGAGCCCTAT CCGCTGGTGG AAAACATGGC CACCTACATC TTCCCCCTTG ATTCCAAGTT CTACACCGGC ACCGACGAAA AGGGCCTGCC CAAAGACGCC ATCGTCAAGA CCGAATATTC CTTTGCCAAC CAGAACGAGT CCGGCACCGG ACCTTTCTAT GTCGAGTCCC GCGAACAGGG CGTGAAGATG GTCTACAAGC GCTTCGCCGA CTACTGGGAC AAGGACAGCA AGGGTAACGT AAGCGAAATC ATCCTCACCC CCATCAAGGA AAACGCGACC CGCACAGCGG CCCTCCTGTC CGGCGGCGTC GACTTCATCG CCCCTGTCCC CCCCCAGGAT TTCGAACGTC TGGGCAGCAA CAAGGACATC AACCTGGTCT CCATGGCCGG CAGCCGCATC ATCACCTTCC AGCTCAACCA GAAGAGAAAG CCTGAATTCG CGAACCTCAA AGTCCGTCAG GCCGTCATCG CGGCCATCGA CAACGCCGGC ATCGTGGCCA AGTTGATGAA GGGCACCGCC ACCGCCGCCC AGCAGCAGGG CCCGGAAGGC TTTGACGGCT ACGTGGAAGG CCTGGCCCCC CGCTTCGACC TGGCCAAGGC CAAGCAGCTG ATGAAGGAAG CCGGTTTCGA GAACGGCTTC GAAGCGACCA TGATCGCCCC CAACAACCGC TACGTGAACG ACGAGAAGAT CGCCGAAGCC GTGGTTTCCA TGCTCTCCAA GATCGGCATC AAGGTCAGCC TGAAGACCAT GCCCAAGGCC CAGTACTGGG ATGAATTCGA CGCCCAGGTG GCCGACATCC AGATGATCGG CTGGCACTCC GACACCGAGG ACTCCGCCAA CTACTCCGAA TACCTGCTCA TGTGCCCCAA CAAGGAAACC GGCAAGGGCC AGTACAACAG CGGCAACTAT TGCAATGCCA AGCTCGACGA ACTGGTCAAC CAGGCCAACG TCGAGAACGA CCGCGTAAAG CGCAAGGCGC TGCTGCAGGA AGTTGAGAAG ATCGCCTACG AAGACGCCGC CTATGTGCCC CTGCACTGGC AGAACCTGTC CTGGGCAGCC AAGAAGGGCG TGGATATCCA GCCCGTCGTC AACATCATGG ACTTCCCGTA CCTGGGCGAC CTAGTCGTGG AATAG
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Protein sequence | MKKLLFFALA FIFLATAAQG KTLKMALDAD PESMDPHVQL SGGMLQYTHL CFDPLIRWTK DMKFEPRLAT KWERIDDLTV RFYLREGVKF HSGNPFTAAD VVWTIDRLKK SEDFKGLFTS FATPKIIDDY TVDIITTEPY PLVENMATYI FPLDSKFYTG TDEKGLPKDA IVKTEYSFAN QNESGTGPFY VESREQGVKM VYKRFADYWD KDSKGNVSEI ILTPIKENAT RTAALLSGGV DFIAPVPPQD FERLGSNKDI NLVSMAGSRI ITFQLNQKRK PEFANLKVRQ AVIAAIDNAG IVAKLMKGTA TAAQQQGPEG FDGYVEGLAP RFDLAKAKQL MKEAGFENGF EATMIAPNNR YVNDEKIAEA VVSMLSKIGI KVSLKTMPKA QYWDEFDAQV ADIQMIGWHS DTEDSANYSE YLLMCPNKET GKGQYNSGNY CNAKLDELVN QANVENDRVK RKALLQEVEK IAYEDAAYVP LHWQNLSWAA KKGVDIQPVV NIMDFPYLGD LVVE
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