Gene Dbac_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1740 
Symbol 
ID8377412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1982156 
End bp1983229 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content65% 
IMG OID645000968 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_003158247 
Protein GI256829519 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGA AAATCTGCCT CATGCCCGGC GACGGCATAG GCCCTGAGAT AGTGACCCAG 
GCCGTGAAGG TGCTGGAGAA GGTGGCGGCA AAGTTCGGCC ACACAGTTGA AACCGAGAGC 
GCGCTCATCG GCGGTGCGGC CATCGACGCC GTGGGCAACC CGTTGCCCGA GGCGACTGTG 
GCCGCCTGCA AGGCGGCGGA CGCGGTGCTG CTGGGCGCGG TGGGCGGCCC CAAATGGGAC 
ACCATCGATC CGGCCATCCG CCCCGAAAAG GGGCTGCTCG GCATCCGCAA GGCCCTGGGC 
CTTTTTTCCA ACCTGCGTCC GGCCGTGCTC TTTCCGGAGC TGGCGGCGGC GGCGTATCTG 
CGTCCGGACA TCATCGGGCA GGGCCTTGAC ATCATGGTCG TGCGCGAACT GACCGGCGGC 
GCCTATTTCG GCGAGCCGCG CGGCGAGACC GTGGTGAATG GCGAGCGGGC GGCCTTCAAT 
ACCATGATCT ACTCCGAGTC CGAGATCGAG CGCATCGTGC GCGTGGCCTG CGAGATTGCC 
CGCAAGCGCG GAAAGAAGCT GTGCTCCGTG GACAAGGCCA ACGTGCTCGA CGTGTCGCGG 
CTGTGGCGAG AGGTGGCCAT TCGCACGGCG GCCGAGTATC CGGACGTGGA ACTGTCGCAC 
ATGTACGTGG ACAACGCGGC CATGCAGCTC ATCCGCGACC CTTCGCAGTT TGACGTCATC 
GTGACCGAGA ACCTTTTCGG CGACATCCTC TCCGATGAGG CCTCCATCAT CACCGGTTCC 
ATCGGCATGT TGCCCTCGGC CTCCATGGGT TCCGGCGGAC CGGCCCTGTT CGAGCCCATC 
CACGGCTCGG CTCCGGACAT CGCGGGCCGT GACATCGCCA ACCCCTTGGC GACCATCCTG 
TCCGTGTCCA TGATGCTGCG CTTCGCCTTT GGCCTGGAGG CCGAGGCCGA GTCCATCGAC 
GCGGCGGTCA AGAGCGTGCT GGCCCAGGGT TTTCGCACCG GCGACATCTT CGTGGGCGAG 
GGCAAAAAAG TCGGCTGTTC GGAAATGGGC GCGTTGGTGC TGGGCGCGAT CTGA
 
Protein sequence
MNMKICLMPG DGIGPEIVTQ AVKVLEKVAA KFGHTVETES ALIGGAAIDA VGNPLPEATV 
AACKAADAVL LGAVGGPKWD TIDPAIRPEK GLLGIRKALG LFSNLRPAVL FPELAAAAYL 
RPDIIGQGLD IMVVRELTGG AYFGEPRGET VVNGERAAFN TMIYSESEIE RIVRVACEIA 
RKRGKKLCSV DKANVLDVSR LWREVAIRTA AEYPDVELSH MYVDNAAMQL IRDPSQFDVI 
VTENLFGDIL SDEASIITGS IGMLPSASMG SGGPALFEPI HGSAPDIAGR DIANPLATIL 
SVSMMLRFAF GLEAEAESID AAVKSVLAQG FRTGDIFVGE GKKVGCSEMG ALVLGAI