Gene Dbac_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1712 
Symbol 
ID8377384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1950083 
End bp1950868 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID645000940 
ProductABC transporter related 
Protein accessionYP_003158219 
Protein GI256829491 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTC CAATGATCGA GATTTTAGAC CTGAGCACTG GCTACAAAGG GCTGCCGGTG 
CTTCGCGGCA TCTCCCTGAC TGTCCGCGAG GGCGAATTCA CGGGCATCCT TGGCCCCAAC
GGCAGCGGCA AGACGACCCT CATCCGCGCT CTGTCCGGAG TCCTGCCGTG CGCCTCGGGC
AGCATCCGCA TCGCGGGCCA TGACATCAAG GCGCTGCCGG CCAAGGCCCG GGCCCGGCAG
TGCGCCACCG TGGCCCAGAA AAACCCCGGC CTGTCCGCAG TGCGCGCCCA GTCGCTGGTG
CTCATGGGCC GTTACCCGTA TGTCTCCTTT CTGGGCGGCT ATTCCCGGCA TGACCATCTG
CGCGCGCGGG AAGCCATGCA GGAGACGAGT TGCCTGCACC TGGGGCAGCG CAGCACCGAG
GCCCTCTCCG GCGGCGAATT GCAACGGGTC ATCACTGCCA AGGCCCTGGC CCAGGACACC
AGGCTGCTGC TGCTGGACGA GGCTGCGTCC AACCTCGACG TGGCCCGGAC CATGGATCTC
TACGAACTGC TCAAGGCCAA AAATGCCGCA GGCCTGACGA TTCTGACCGT GGCCCACGAC
CTGAACCTGG CCGCTCTCTA TTGCCAGCGC CTTGTCTTTC TGAAAAACGG TTCCGTCGCG
GCCGATGGCC CGACCCGCGA AATTTTTACG GCCCAAACCT TGAGCGAGAT TTATGAAACA
CCCCTTGCCG TGGCTGCGCA TCCCCTCACC GGGGCTCCCC AGGCTTATCT GGTACCTCGT
GCTTAA
 
Protein sequence
MSTPMIEILD LSTGYKGLPV LRGISLTVRE GEFTGILGPN GSGKTTLIRA LSGVLPCASG 
SIRIAGHDIK ALPAKARARQ CATVAQKNPG LSAVRAQSLV LMGRYPYVSF LGGYSRHDHL
RAREAMQETS CLHLGQRSTE ALSGGELQRV ITAKALAQDT RLLLLDEAAS NLDVARTMDL
YELLKAKNAA GLTILTVAHD LNLAALYCQR LVFLKNGSVA ADGPTREIFT AQTLSEIYET
PLAVAAHPLT GAPQAYLVPR A