| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1675 |
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| Symbol | |
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| ID | 8377347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1909475 |
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| End bp | 1910179 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645000904 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003158183 |
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| Protein GI | 256829455 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTTG AACCGCTGCG CTACGATCCT CCGACCGAGC CCAGGCTGGC CGTCATCCAC
GAAGACCGGG ACATGGTCGT GGTCAACAAG CCGAGCGGCC TCCTTTCCGT GCCCGGCCGC
ACCCCGGAGC TGTTCGACTC GGTCCTGTCA CGGGTGCGCG AAATCCACCG GGGCGCCCAG
GCCGTGCACC GGCTGGATCT TGGCACCTCC GGAGTGCTGG TCGTGGCCAC CCGGCGCAAA
GCCGAAACGA TTCTGCGTCA GCAATTTCAA GACCGCCTGA CCCGCAAGCT CTACCTGGCG
CGGGTACAAG GCGTGATGAG CGAGGACTCC GGACAGGTCG ACCTTCCGCT CATCTGCGAC
TGGCCCAACC GCCCCATGCA GATGGTCTGT CATGACACCG GCAAACCGGC CCTGACCGAT
TATCAGGTGC TTGAAAGCGA CGGGGAAAGC ACCCTCGTCC TCCTGCGCCC GCATACCGGC
CGGTCCCACC AGCTGCGCGT ACACATGGCC AGCCTTGGCC ATCCCATCCT GGGCGACAAC
CTCTACGGCG AGCAGAGGCC CGGCGAACGC CTGCTGCTCC ACGCCAGCCA ACTGGGCCTC
TATCACCCCT ACAGCGGAGA ATGGACCACC TTCCACGCCC CCTGCGACTT CGCGGAGCAC
ATAGCCCCCA TCGTGCTGAA AGCGCCCACC CTGGCCAGTC CATAA
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| Protein sequence | MSLEPLRYDP PTEPRLAVIH EDRDMVVVNK PSGLLSVPGR TPELFDSVLS RVREIHRGAQ
AVHRLDLGTS GVLVVATRRK AETILRQQFQ DRLTRKLYLA RVQGVMSEDS GQVDLPLICD
WPNRPMQMVC HDTGKPALTD YQVLESDGES TLVLLRPHTG RSHQLRVHMA SLGHPILGDN
LYGEQRPGER LLLHASQLGL YHPYSGEWTT FHAPCDFAEH IAPIVLKAPT LASP
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