Gene Dbac_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1545 
Symbol 
ID8377214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1748158 
End bp1749594 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content58% 
IMG OID645000772 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003158054 
Protein GI256829326 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.224359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACA TTCTCATAAT TGACGACGAT CAGGATTTCT CCCGTGCATT CCAACGGATC 
ATTGAACGCA TGGGACACCC CTGCCGGATC GCTCAGAACA TCCGGGACGC TTTTGCGCAG
CTCAAAAGCA TGAACTGCGA TCTCATCTTT CTCGACGTCA ATCTGCCCGA CGGCAACGGG
CTGGCTCACA TCAAGCAATT CCAGTCCTTT CCCTCCCTGC CCGAGGTCGT CATCCTGACC
GGCGACGGGG ATTCCGACGG CGCGACCCTG GCCATCGCCA ACGGAGCCTG GGATTATGTG
GGCAAGCCCA TCTCCCTGAA CAACATCACC CTCATCCTGC AACGCACCAT CGCCTACCGG
GCCTCCAAGG AACAAAACCG AGGGCCGCGC AAGGTGAAAC GCAGCGCCAT CATCGGCGAA
AGCCCGGTCA TCATGGGTTG CCTTGAGGTC ATGGGCAAGG CGGCAGTCAG CAAGTCCAAC
GTGATCATCA CCGGCGAAAC GGGTACGGGC AAGGAACTTT TCGCGCGCGG AATCCACGAA
AACAGCGACA CACCCGGCAA GCTGGTGGTC ATCGATTGCA CAAACCTGTC CACCCATCTG
GCTGAGAGCA CCCTCTTCGG CCACACCAAA GGCTCCTTCA CCAGCGCTCA CGAAGCCCGG
GACGGCTTGT TCAAACTGGC CAACAACGGC ACGGTTTTTC TGGATGAAAT TGGAGAACTG
AGCCTTGACC TGCAAAAATC CCTGCTGCGG GTGCTGCAGG AACGCAAATT TCGCCCCATC
GGTTCGGAAA AGGAAGTCAG TAGCAATTTC AGGGTCATCG CCGCCACCAA CCGCGACCTG
CGACTCATGG TCGAGCAGGG ACTTTTCCGC AACGACCTCT ACTATCGTCT GAACGGACAC
CAGATAGAGA TTCCGCCCCT GCGCGCCCGC AAGGAGGACA TCCTCCTGCT GGCCGAGTAT
TATACGGAAA AATTCTGCCG CGAGAGCAGC ATCACGCCAA AAACGCTCAC GCCCGAATTT
CTTAACGCCC TCCAAGCGTA CAACTGGCCC GGTAATGTAC GCGAATTCGT CAACACCGTA
GCCGTGGCCA TCGACAACTG TCAGGATGAG CCGTCCCTGT ACAGCCACCA CCTGCCCGTG
GATGTGCGCA TCGGCATTGC CAAAAACTCG TTTCGCCATC ATCCGGACAA GGAGCAGCCC
ACCCTGCTTG AACCCGGCCG CCATCACGGT GCCATTCCTC TTCCTTTTTC CCCGGGAGAT
GACCTGCCTC CCCTGCGCGA GGTGCGCGAA ATCGTCGTCG GCCAACTCGA AAACGCTTAC
ATGCGGCAGC TGCTCGAACT CTGTGACAAC GATGTTCCAA CGGCCTGCGA GCGTTCCGGC
CTCTCCAGGG CGCGGCTTTA CGAACTGCTC AAGAAGCATT CCATCCGTTT GAAATGA
 
Protein sequence
MANILIIDDD QDFSRAFQRI IERMGHPCRI AQNIRDAFAQ LKSMNCDLIF LDVNLPDGNG 
LAHIKQFQSF PSLPEVVILT GDGDSDGATL AIANGAWDYV GKPISLNNIT LILQRTIAYR
ASKEQNRGPR KVKRSAIIGE SPVIMGCLEV MGKAAVSKSN VIITGETGTG KELFARGIHE
NSDTPGKLVV IDCTNLSTHL AESTLFGHTK GSFTSAHEAR DGLFKLANNG TVFLDEIGEL
SLDLQKSLLR VLQERKFRPI GSEKEVSSNF RVIAATNRDL RLMVEQGLFR NDLYYRLNGH
QIEIPPLRAR KEDILLLAEY YTEKFCRESS ITPKTLTPEF LNALQAYNWP GNVREFVNTV
AVAIDNCQDE PSLYSHHLPV DVRIGIAKNS FRHHPDKEQP TLLEPGRHHG AIPLPFSPGD
DLPPLREVRE IVVGQLENAY MRQLLELCDN DVPTACERSG LSRARLYELL KKHSIRLK