Gene Dbac_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1540 
Symbol 
ID8377209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1743748 
End bp1744347 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content59% 
IMG OID645000767 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003158049 
Protein GI256829321 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG CGCACAAGGA CTACACCGGC GACAAGTTTG GGATGTGGCT GTTCCTGTTC 
ACCGAGATCC TGCTCTTCGG CGGGCTTTTT CTCCTGTATT CGGTCTACCT GCATCGCTAT 
CCGGCGGAGT TTCATGCAGG CGGGCTGCAG CTCAGCCGTC TTTTTGGCAC GCTCAACACG 
GTCGTGCTCA TCACCTCGAG CCTGACCGTG GCACTGGCCA TCTCCGCACT GCAGCAGGGA 
CGCAAGGCGC TCTGCCTGTG GCTTTTGACC GCGACCATCA CGCTGGCCGG GGTGTTCATG 
GTCAACAAAT ACATCGAGTG GTCGGCCAAG ATCGCTCACG GCATCTATCC TGGCTCCCCG 
GAGATGGCGG CGGGAGCGGG CGGCACGAAC ATCTTCTTCG GCCTCTACTA TGTCATGACC 
GGCGCCCACG GCCTGCATGT GGTCATCGGC GCGGCCATCC TGGGCTACTG CATGCTGCGT 
ATCCGGCAGG GCAGGGTTAC GGCCGAAGAC TTCGGGGTGC TTGAAAACGG CGGCCTGTAC 
TGGCATCTGG TCGATCTGAT CTGGATATTC CTTTTCCCAC TTTTTTACCT GATCAGCTGA
 
Protein sequence
MSEAHKDYTG DKFGMWLFLF TEILLFGGLF LLYSVYLHRY PAEFHAGGLQ LSRLFGTLNT 
VVLITSSLTV ALAISALQQG RKALCLWLLT ATITLAGVFM VNKYIEWSAK IAHGIYPGSP 
EMAAGAGGTN IFFGLYYVMT GAHGLHVVIG AAILGYCMLR IRQGRVTAED FGVLENGGLY 
WHLVDLIWIF LFPLFYLIS