| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1529 |
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| Symbol | |
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| ID | 8377198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1734142 |
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| End bp | 1735899 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645000756 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_003158038 |
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| Protein GI | 256829310 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0450756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAA TAATATCGAA TTCTTTTTTC GTCTTTTTTT TATTTTTTAT CTGCTCGTAT
TGTTTTATTA CCGATATAAA TCCGTGCTTT GCCTCTTCTG AGATAATTCG TCAGCAAGAA
CAGATAAATC GTGAACAGGA AGAGCAGAGA AGAAAATTAA AGCAACAGCA TGAAAGTGCA
CAGGAAAGAT TGCCGTCAAG AATTGATGTC GATCAGCCAG CGTCAGTGAT GGAGGGTAAG
GAAACGGGGG GCTGCGTTCA GATCGACCAT ATTGTTTTTG TTGGTGCGAC ACTGCTTTCC
GAGTCCGATA TGGCCAGATT GTCCGAGCCA TTCATCAGAC GCTGCCTGAA CATATCCCAG
ATCAACGAAG TGTTGCGGGC GACAACCAAT CTTTACATAC AGCGCGGCTA TGTCACGACA
CGTGCCATTG TGCCTGCGCA GGATCTTGGC TCAGGGAAGC TCGAAATACG CGTTATTGAG
GGCGAAGTTG AGAGCGTTAT GCTCAACGAG GATTCCGCTG CGGACAGGCG GCGGATCGCC
ATGACTTTTC CTTCCGGGAT CGTGGGCAAG CCGCTCAACC TGCGCGACAT CGAGCAGGGC
ATGGATCAGC TGAATCGTTT GCCCTCCGGC AACGCCCAGC TACGCATAGA GCCTGGGGAA
AAAGTCGGGG GCAGTCGCAT CGTGGTTACG GATGTGCCGG GCAAGTTCTG GCGCTTTCGG
GTCGGGCTGG ACAATTCCGG CCAGGAAAGC ACGGGTGAGA CCAAATCATC CGCGTCCGTC
GACACGGACA ATCTGCTTGG CCTGAACGAC ATGCTGTCCC TGAACCTGAG CGCTGACGCC
AAAGCCGTGC TCGACGGGTC CCGGCCTGGA AGCAGAAGCG TTTCAGGATA CTACACCGTA
CCCTTCGGGT ATTGGAGCGT GACGGCCAGC GCCAGTGTTT CTGAGTACTA CACTCACCTG
GATGGTGGCG GAGCTCGGTA TGCGAGCGAC GGACGCACCT CAACCTATGG CCTGGATGTG
AACCGGGTTT TGCATCGCAG CAGTCAAAGC AAGACTACTG CGGGCATCTC ATTCAACGTC
AAAGACATCA ATAACTACAT CGAGAACGAG CGCCTTGTTG CCGGCAGCTA CGACTTGTCC
ATTTTCAGTG CATCGCTGGG TCACCATCGC AGATTTTTAG ATGGAACGCT TGGCTTGAGC
GGTGAATTCC ATCTTGGACT TCCCCTGTTC GAGGCTGACC GGGACAGTTC CTCGGATCGG
AGTGTCCCTA AACATGAATT CCGCAAGCTC TCCCTGACGG GCAGCTGGAT GCGGCCTTTT
GAGATTGCAG GGCATCCTTT CACATTCAGC ACGCAGGGCG TGGCGCAGTG GTCGCCCGAT
ACCCTCTACA ACTCCGAGCG TCTGGATCTG GGCGGCCGGT ACACGGTTCG CGGCTTCCAG
CTCGATAGTC TTGGCGGGGA TAGCGGCGGA TACGTGCGCA ACGAGATTGC CATGTCCATT
CTGCCTCAAG CCCGCTCTGC GTGGTTCGCC TCGGTATTCA ACGATCTGCA GGTATACGCA
GGGTATGATG CCGGCTTCAT CCACCGTGAC AAGGAAGACG AATACGAACG GGGTGTCCTG
CAAGGCGCGG TTTTGGGGGT GCGTACCGAG GGCGGCCCCC TTGAGACCGA CCTGTGCGTG
TCGCGCCCGT TGGACGCGCC GTCGTTCATG AAAAACAGGG ATTGGGAGAT CTATTGGTCG
CTGAACTCTA ATTTTTGA
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| Protein sequence | MYKIISNSFF VFFLFFICSY CFITDINPCF ASSEIIRQQE QINREQEEQR RKLKQQHESA
QERLPSRIDV DQPASVMEGK ETGGCVQIDH IVFVGATLLS ESDMARLSEP FIRRCLNISQ
INEVLRATTN LYIQRGYVTT RAIVPAQDLG SGKLEIRVIE GEVESVMLNE DSAADRRRIA
MTFPSGIVGK PLNLRDIEQG MDQLNRLPSG NAQLRIEPGE KVGGSRIVVT DVPGKFWRFR
VGLDNSGQES TGETKSSASV DTDNLLGLND MLSLNLSADA KAVLDGSRPG SRSVSGYYTV
PFGYWSVTAS ASVSEYYTHL DGGGARYASD GRTSTYGLDV NRVLHRSSQS KTTAGISFNV
KDINNYIENE RLVAGSYDLS IFSASLGHHR RFLDGTLGLS GEFHLGLPLF EADRDSSSDR
SVPKHEFRKL SLTGSWMRPF EIAGHPFTFS TQGVAQWSPD TLYNSERLDL GGRYTVRGFQ
LDSLGGDSGG YVRNEIAMSI LPQARSAWFA SVFNDLQVYA GYDAGFIHRD KEDEYERGVL
QGAVLGVRTE GGPLETDLCV SRPLDAPSFM KNRDWEIYWS LNSNF
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