Gene Dbac_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1454 
Symbol 
ID8377119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1644460 
End bp1645104 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content59% 
IMG OID645000678 
Producttransaldolase 
Protein accessionYP_003157964 
Protein GI256829236 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00117574 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTCT TCATCGATAC GGCGAACTTG ACCGAGATCA AGGCCGCCAT GGAAATGGGA 
CTCGTGGACG GGGTGACCAC CAACCCTTCG CTCATGAGCA AGGAAGCGGA TGACTGGCGC 
GACATCGCCG GCACAATCTG CAAGCTGGTC CCGGGGCCGG TCAGTCTTGA GGTTATCGCG 
CTCGATACCG AAGGCATGGT GCGTGAAGCC AAGGATCTGG TGCAGTTCGG GCCCAATGTC 
GTGGTCAAGG TGCCCATGAC GGCAGAAGGG CTCAAAGCCG TGCGCATCTT GAAATCCATG 
GACATCGAGA CCAACGTGAC CCTGATTTTC TCCGCCGCCC AGGCCTTGCT TGCGGCCAAG 
GCGGGGGCGG CCTACGTCAG CCCGTTCTTG GGTCGGCTCG ACGATGTCGG TCAGGACGGC 
ATGGAGTTGG TGCACCAGAT TATGGGCATC TTCGGCAATT ACGGATTCAC CACGCAGATC 
ATCGCGGCCA GCATACGCAG CCCTTTGCAC GTGCTCGACG CAGCCATGGC CGGAGCCCAC 
ATCGCCACGG TCCCGTACAA GATCCTGACC CAGCTTATCG ACCATCCCTT GACCGACAAG 
GGCATTGCCG CGTTTCTCAA GGATTGGGAG AAGAAAGGCA AATAA
 
Protein sequence
MQFFIDTANL TEIKAAMEMG LVDGVTTNPS LMSKEADDWR DIAGTICKLV PGPVSLEVIA 
LDTEGMVREA KDLVQFGPNV VVKVPMTAEG LKAVRILKSM DIETNVTLIF SAAQALLAAK 
AGAAYVSPFL GRLDDVGQDG MELVHQIMGI FGNYGFTTQI IAASIRSPLH VLDAAMAGAH 
IATVPYKILT QLIDHPLTDK GIAAFLKDWE KKGK