| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1445 |
|---|
| Symbol | |
|---|
| ID | 8377110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 1635129 |
|---|
| End bp | 1636868 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645000669 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003157955 |
|---|
| Protein GI | 256829227 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0779886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTC GACGTGTTCT CTTAACCGGA ATGCTCATCG CGGCGTTCCT GGGCGTCACC
ACTTTAGGCT TTGCCGATGA GGCGGCCCAG AAGGCGGCGG CGAAAAAATG GATCGAAGAG
GAGTTTCAGC CTTCGACGCT CAGCAAAGAT GAGCAGATGA AGGAAATGGA ATGGTTCATG
AAAGCGGCCG CCCCCTTCAA GGGCCTGGAG ATCAAGGTTG TCTCCGAAAC AATTCCCACT
CATGAATATG AGTCCAAGGT CATGGCCAAG GCATTCTATG ACATCACTGG CATCAAGGTC
ACTCATGACC TGATCCAGGA AGGTGACGTC ATTGAGAAGC TGCAGGTCCA GATGCAGTCC
GGCGAGAACG TTTTCGACGG TTACGTCAAC GACTCCGACC TCATCGGCAC GCATTTCCGC
TACGGCGCAG TGGTCAACCT GACGGACTGG ATGGCGGGCG AAGGCAAGGA CGTGACCCTG
CCGACCCTCG ACATCGACGA CTTCATGGGC AAATCCTTCA CCACCGGCCC CGACGGTAAG
CTCTATCAGC TGCCCGACCA GCAGTTCGCG AACCTGTACT GGTTCCGTTA CGACTGGTTC
CAGCGTCCCG AACTCAAAGA AAAGTTCAAG GCCAAATACG GCTATGAGCT GGGCGTGCCG
GTCAACTGGT CCGCCTACGA AGACATCGCC GAATTCTTCA CCAACGACGT CAAGGAAATC
GACGGCAAGG CCATTTACGG TCACATGGAT TACGGCAAGA AGGCTCCCGA TCTTGGCTGG
CGTTTTACCG ACGCATGGCT GTCCATGGCC GGAGCCGGCG ACAAGGGCAT CCCCAACGGC
GTGCCCGTCG ATGAATGGGG CATCCGCGTG GACGGCTGCC GTCCTGTCGG CGCCAGCGTA
TCCCGTGGCG GCGCAGCCAA CGGCCCGGCC GCCAAGTACG CCCTGCGCAA GTACATGGAC
TGGCTGCGTC TCTATGCACC TCCCGGCGCC CTGGGCATGG ACTTCTATCA GTCCCTGCCA
AGCCTGGCCA AGGGCAACGT GGCCCAGCAG ATCTTCTGGT ACACCGCCTT CACGGCCTCC
ATGGTCGAGA AGGGCACACC CGTGGTCAAC GACGACGGCA CGCCCAAGTG GCGCATGGCT
CCCTCCCCTC ATGGCCCGTA CTGGGAAGAA GGGCAGAAGC TCGGCTATCA GGACTGCGGT
TCCTGGACGC TCCTGAAGAG CACTCCTGTT GATCGCCGCA AGGCCGCCTG GCTCTTCGCG
CAGTTCTGCG TGGCCAAGTC GACCTCGCTC AAGAAAGCCC ATGTCGGCCT GAACCCGGTT
CGCGATTCCG ACATCCGTCA TCAGTCCTTC ACGGACCGCG CCCCCATGCT CGGCGGTCTG
GTTGAGTTCT ATCGCAGCCC GGCCCGCGTG GCCTGGACGC CCACCGGCAC CAACGTGCCC
GATTACCCCA AACTGGCCCA GCTGTGGTGG CAGAACATCG GTGAAGCCGT CTCCGGTGAA
GTCACCCCTG AAACCGCCAT GGACAACCTG GCCGCCGAAC AGGACAAGAT TCTGGAACGC
CTGGAGCGCG CCAATGTTCA GGGCGATTGC GGCCCGAAAA TGAACGAGCC CCGGGACGAG
CAGTACTGGC TCGACCAGCC CGGCGCTCCC AAGCCCAAGC TTGAGAACGA GAAGCCCAAG
GGCGAAACGG TTGATTACGA TCAGCTGATT CAGGCCTGGA AGGCCGGCAA GGTCAAATAG
|
|---|
| Protein sequence | MQVRRVLLTG MLIAAFLGVT TLGFADEAAQ KAAAKKWIEE EFQPSTLSKD EQMKEMEWFM
KAAAPFKGLE IKVVSETIPT HEYESKVMAK AFYDITGIKV THDLIQEGDV IEKLQVQMQS
GENVFDGYVN DSDLIGTHFR YGAVVNLTDW MAGEGKDVTL PTLDIDDFMG KSFTTGPDGK
LYQLPDQQFA NLYWFRYDWF QRPELKEKFK AKYGYELGVP VNWSAYEDIA EFFTNDVKEI
DGKAIYGHMD YGKKAPDLGW RFTDAWLSMA GAGDKGIPNG VPVDEWGIRV DGCRPVGASV
SRGGAANGPA AKYALRKYMD WLRLYAPPGA LGMDFYQSLP SLAKGNVAQQ IFWYTAFTAS
MVEKGTPVVN DDGTPKWRMA PSPHGPYWEE GQKLGYQDCG SWTLLKSTPV DRRKAAWLFA
QFCVAKSTSL KKAHVGLNPV RDSDIRHQSF TDRAPMLGGL VEFYRSPARV AWTPTGTNVP
DYPKLAQLWW QNIGEAVSGE VTPETAMDNL AAEQDKILER LERANVQGDC GPKMNEPRDE
QYWLDQPGAP KPKLENEKPK GETVDYDQLI QAWKAGKVK
|
|---|
| |