Gene Dbac_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1438 
Symbol 
ID8377103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1628044 
End bp1629663 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content66% 
IMG OID645000662 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003157948 
Protein GI256829220 
COG category[C] Energy production and conversion 
COG ID[COG0578] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID[TIGR03377] glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.198287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATAC TTACAACCCG GGTTCTCATC ATCGGTGCCG GTGTCACCGG CGCGGGATTG 
CTGCGCGATC TCGCTCTGCG CGGGGTGCAG GCGCTTCTGA TCGAACAGCG CGACGTCAAT
TCAGGCGCAT CCGGCGGGAA CCACGGCCTC TTGCACAGCG GCGCGCGCTA TGTGGCCTCG
GATGTGGAGG CTGCGGTCGA ATGCAGGGAA GAAGGCGACA TCCTGCGCCG ACTCGCGCCG
CAGTGCATAG AGGACACCGG AGGGCTTTTT GTGGCCGTGC GCGGAGACGA CGAAAAGTAT
GCCTCTGATT TTTCCGCTCT TTGCGCCAAA AGCGGCGTTC CCTGCCGTGG ACTGGAATTG
AGCACGGCCC GCGCCATGGA ACCCGCCCTG TCGGAGAATC TCATCGCCGC CTTTGCGGTG
CAGGACGGCG CGGTGGATCC GTTCATGCTC TCCCTCGATA ACATCGCCCA GGCCTTGAGC
CTGGGGTGCT TTGTGCGCCG CAATCTCGCC GCCGTGTCCA TGGAAGTGCA GGACGCACGC
GTCACCCTTG TGCGCTGCCG GGATATAACC ACAGGCGCCG AGGTCCTGAT CGAAGCCGAA
CTCGTGATCA ACGCCTCGGG GGCCTGGGCA GGACGGATCG CGGCCCTGGC CGGGGCGCAC
ATAAACATAC TCTATTCCAT GGGCAGCCTC ATCATCACCC AGGACCGCAT CGCCACCCGG
GTCATCAACC GGCTGCGTCC GCCTTCGGAC GCGGACATCC TTGTGCCCGG CGGCACCGTG
TCCATTCTCG GCACCACTTC CATCCGGGTG CCAACCCCCG ACGGATGCAG GCCCAGCGTG
GCGGAAACAG ACCGCATTAT CGACGACGCC CGCCACATGC TGCCCATCCT GGAGCGCACG
CGCTTCATCC GCGCCTACGC CGGAGTCCGC CCCCTGGTTT CCCTCGGCCC GGCCGGGGAC
GACCGCGCGG TCAGCCGTGG CTTCTCGCTC ATCGACCACG CCGATGAGGG CGTGTCGAAT
TTTATGACCA TCACCGGCGG TAAGCTGACC ACGTATCGGC TCATGGCCGA AAAAGCGGCG
GATCTGGCCT GCGCGAAACT CGGCGTGTCC GCGAAGTGCC GGACGCGCAC GGAGCCGCTC
CCGCCCTCCA CCATGGGCAA GTGGACGGAG CCCGGCCGGG GCCCGAAAAG CTGGATCGAA
AGCCGGACCG AAGACGACAT CGTGCTGTGC GAATGCGAGA TGGTTTCGCG CAGGGTCATC
GATTCCATCG TGGACGAGGC CAAGGACATG CGCGGCCGTT CCATGCTCAA GGCCATCGGC
ATGCGCAGCC GGGTCGGCAA GGGGCCGTGC CAGGGCGGGT TCTGCGGACC GCGCATCACC
GGGCACCTCT ATGACCGCGA GGTTTCCACC GGGACGCAGG GGCTGGCGGA GCTGAAAACC
TTCACCGAGC GCCGCTGGAG AGGCTTTTCG CCGATCCTCT GGGGCGTGCC GCTCATGCAG
GCCGACTTGC AGGAGGCCCT GCATTGCGGG GCCATGGACT TGGAGTTCGG GCCCGCCCCT
TCGACCAGGG ACGAGGAGAG TGAAAAATGC CCTGCCGCGG CCGTCAAGGA GCAGCCATGA
 
Protein sequence
MTILTTRVLI IGAGVTGAGL LRDLALRGVQ ALLIEQRDVN SGASGGNHGL LHSGARYVAS 
DVEAAVECRE EGDILRRLAP QCIEDTGGLF VAVRGDDEKY ASDFSALCAK SGVPCRGLEL
STARAMEPAL SENLIAAFAV QDGAVDPFML SLDNIAQALS LGCFVRRNLA AVSMEVQDAR
VTLVRCRDIT TGAEVLIEAE LVINASGAWA GRIAALAGAH INILYSMGSL IITQDRIATR
VINRLRPPSD ADILVPGGTV SILGTTSIRV PTPDGCRPSV AETDRIIDDA RHMLPILERT
RFIRAYAGVR PLVSLGPAGD DRAVSRGFSL IDHADEGVSN FMTITGGKLT TYRLMAEKAA
DLACAKLGVS AKCRTRTEPL PPSTMGKWTE PGRGPKSWIE SRTEDDIVLC ECEMVSRRVI
DSIVDEAKDM RGRSMLKAIG MRSRVGKGPC QGGFCGPRIT GHLYDREVST GTQGLAELKT
FTERRWRGFS PILWGVPLMQ ADLQEALHCG AMDLEFGPAP STRDEESEKC PAAAVKEQP