Gene Dbac_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1394 
Symbol 
ID8377059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1566134 
End bp1566757 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID645000620 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003157906 
Protein GI256829178 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCTG ATACCTATCT CGCCTTTCTC TTGGCCACCA TAGTAGTCTT GGTCATTCCT 
GGACCGACTA TCATGTTGGT GGTGAGTTGT TCGCTGACCC AAGGCAAACG CTTAGCCCTG 
CCGCTAGCCC TGGGCGTCGG TCTTGGCGAC ACCGTGGCAA TGATTGCGTC CATGGCCGGG 
CTTGGCGCAT TGCTTGCCAC CTCGGCCACG CTGTTCACTG TGCTCAAGTG GGTAGGTGCG 
TTCTATCTCG TCTACTTGGG CGTAAAGACC TTTCGAACCA ACCCCGTGTC GGGCAAGGAC 
TTGCCGCGTG TTGCTTCTGT ATCGCGCGGG GCCAGCGTGT TCCGTGCATT TGCGGTTACG 
GCTACCAATC CCAAGTCTAT TGCCTTTTTC TGCGCCTTCA TGCCTCAGTT CATCAATCAC 
GCCGAACCGG TCATGGCTCA AGTCCTCATC CTTGGATCGA CCTTTGTGAT CCTGGCGGTA 
GTCAACGCCA CTTTGTACGC GCTTCTGGCG GCCAGGGCGC GATACGCAGT GACGAATCCC 
CGGATCATGA AGATGGTCAA CTGGGCAGGT GGCTCTGCCC TGATCGGCGC GGGGGTTTTG 
ACCGCTGCCA TACGGCGGAC GTGA
 
Protein sequence
MSPDTYLAFL LATIVVLVIP GPTIMLVVSC SLTQGKRLAL PLALGVGLGD TVAMIASMAG 
LGALLATSAT LFTVLKWVGA FYLVYLGVKT FRTNPVSGKD LPRVASVSRG ASVFRAFAVT 
ATNPKSIAFF CAFMPQFINH AEPVMAQVLI LGSTFVILAV VNATLYALLA ARARYAVTNP 
RIMKMVNWAG GSALIGAGVL TAAIRRT