| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1382 |
|---|
| Symbol | |
|---|
| ID | 8377047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 1551709 |
|---|
| End bp | 1554447 |
|---|
| Gene Length | 2739 bp |
|---|
| Protein Length | 912 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645000608 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003157894 |
|---|
| Protein GI | 256829166 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACACCT CTTTTTCTCA TCATGAGCCA GACCCGGGGC ATTTGAAAAA TGCTTCTGTC
GAGGACCGGT CCCTGCGTTC CATCCTGCAA CAGATCGAAG CGCTTCCATC TCTTCCCGCC
GTCGCCAATA CCATCCTGGG GCTGGTTCTG ACCAAGGACT TCGACCATTC CAAACTGGCG
CGCATCATCG AGACCGACCC CGCCATGACC GTCAAGGTTC TTGAGCACGC AAACAGCGCT
ACCTATGCCA GCCGTGGGCA GGTGGTCCAG GTGGAGCAAG GGCTCAATCG TCTGGGCAGC
AAAGTGACGC AGACGCTCAT GCTCTCCATG CTCATCAAGG ATTCCCTGAT CAAGGGCGAC
AAGAAGTCCG AAGCGATTCA GACCGCGCAC TGGAAACACA GCCTGGCCAC GGCCGTATTC
GCCTCCCTCA TCGCGGCCAA GGCGTCTCCC GCCCTGGCCG GCGAAGCCTT TGGCGCGGGC
ATCATGCATG ATATCGGCGG GATTTTCCTG CAGCTGCATC TTCAGGAACA GTATGTTCAG
GTCACGGAGC GGATGGAGGA ATTGTACGAG CCCGTCCTTG AGGCTGAGCA ACAGGTCTTC
AAAACCGATC ATACCGCCGT CGGCCGCTGG ATTGCCGAGA AATGGAAACT GCCCCAGTCC
ATGACCGACG CCATCTGGCT GCATCATCAT ACGGCTGCGG CCCTGGAAAC CTTCAAGGAC
AACACCCGCC TTGTGGCCAT CGTGGCCCTG GCCAACATTC TGGCGCATTC GACCCTCATG
GACTCGCCTC GGGTCATGGC CCGCGAAAAG CAGCGTCAGC TTGGCCTGCA GGAAGTGCTG
GGCCTTGGCG ACAAAGAGAT GCAGGCGATT CTGACCGCCT TTGCCCCGGC CTTTGCCGAG
AGGGCCGAAC CTTTCGAGCT GGACGGCGAT CAGGTCGGCC TTTTTCTTTC ATCTCTGCAA
AAGGCCAATC AGCAGCTCAT GCGCATGAGC CTTGATCTGG AACTGGCCAA CGGCCGACTG
GAGGACGCTC ACCGCTTCAC GAGCATGGGC TCCACGGTGG GGCTCAAGAT GAGCAAAGCC
AGGACCCCGG ACGAAGTTTT CGAATCAGCG GCCATGTGCA TGCATGACAG TGTCGGAGTT
CGTGGCGGTT TTGTATACTG GATCGTCCCT GCCGAGCGCA TTATGCAGGG TCTGGTCTGG
AACGGTAACG GCCACCGGCG TGTCATCTCC TATCCGCTGG AAGGTGACGG CCTGCCGGCC
TTGAATGGCG GGACCAGTCT GCCCGACAAC CTGAAGGCCA TTCTGCTGAC GCATCACGAA
CGTCACGAAG GCGCTTCCCT CATGGACCGG GAGCTCAGGC TCAAGCAATT TTTCGTGGTG
CGAGGATATT GCCTCTTTCC CCTTGTCGGC AGTGATTTCA CCGGCGAGAT TTGCATCCTG
CGCTCGGGCG ACCGGCCGTC CAAGATGACC CCCCAGGAAT ACATGGGGTA TTCCCAGGTC
TCGTGCGTGG CTTCGGCCTC GCTTGACCGG GTACGGCTCT TCGACAGCCT GCAACTGCGC
GCCGACGAGC TGTCCCTGGC CCTGTGGAAG AACCAGCAGA TCAACCTGCA GCTCCTGCAG
ACCGAGCGGC TGGCGGCGGT GGGGCAACTG GCGGCAGGCG CGGCCCATGA GATCAACAAC
CCCCTGGCTA TCATCTCCGC GCGCACCCAA TTGCTGGAAA GCCGTGAAAA CGACGAGAAG
AAGCGCCGGG ACCTGCACCA GATCTCCGAA CAGATCGAAC GCATCTCGTC CATCCTGCAG
AGCCTCATGG GCTTTGCCAG ACCCAATGCG CCCCAAGTCA TCAATCTGGA CATCAATTCC
CTGTTGCTCA AGATCATCGG CCTAGTGGAA TCAATTTTCC AAACCCACCG CATCCCCATC
GTTCAGAGCC TTGCCCCGGA CCTGCCGCTC ATCCTGGCCG ACGCCAATCA ATTGGAGCAG
GTTTTTCTGA ATCTGGTCAT AAATGCCCAG CACGCAATGG AGAAAGAAGG CGGGGTGCTG
ACCGTAAGCT CCGCCTTCAT GCCCGACGGA AAGCGCATCA GCATCTCCGT CAGGGATACC
GGCACGGGCA TTTCGCCGGA AAATCTTTCG CGCATCTTCG ATCCCTTCTT CTCCACCAAG
TCCGAAGGAA AGGGCACGGG GCTGGGGCTG TCCACGGCAT ATGGCATCGT CACCAACCAT
TATGGCGAGA TCAAGGTGAT CAGCACGCCG GGTCAGGGCA CGGAAATGAT CGTCGTACTG
CCGGTGTCCA CGCCGGTGAC CCTTCCTGAA AAGCCGGTCG TGCGCCTGGA GACCGAATGC
GCCATGCCAA CGGCGACCAA AGGGCACAGA ATTCTGGTCG TCGATGACGA ACAGCACATT
CGCGACATTC TCTCCGAAAC CCTGCGCGAG GCCGGTTATG TTGTCGAAAC CGCGCCCAAC
GGAGATGAAG GTGTCCGTAA ATTGCGTTCG GGTTCTTTCG ATCTGATTCT GCTCGACATC
CGCATGCCCA TCCATTCCGG GCTCGACGTG TTGAAGCTGC TGCGTCGCAA CGGCGGCGCT
CCGCCCGTAA TAATCATTAC GGGCCTTGCT TCTTCCGAGG AGTTGGAAGA AGCCTTGCGT
CTTGGTGCAG CCAAGTGTAT ACGCAAGCCC TTTCATTTGA AGACCCTGCT GTCCGACATC
TCCGGTATTT TACATTCGGG CTGTCCCGCG AACAATTAA
|
|---|
| Protein sequence | MDTSFSHHEP DPGHLKNASV EDRSLRSILQ QIEALPSLPA VANTILGLVL TKDFDHSKLA
RIIETDPAMT VKVLEHANSA TYASRGQVVQ VEQGLNRLGS KVTQTLMLSM LIKDSLIKGD
KKSEAIQTAH WKHSLATAVF ASLIAAKASP ALAGEAFGAG IMHDIGGIFL QLHLQEQYVQ
VTERMEELYE PVLEAEQQVF KTDHTAVGRW IAEKWKLPQS MTDAIWLHHH TAAALETFKD
NTRLVAIVAL ANILAHSTLM DSPRVMAREK QRQLGLQEVL GLGDKEMQAI LTAFAPAFAE
RAEPFELDGD QVGLFLSSLQ KANQQLMRMS LDLELANGRL EDAHRFTSMG STVGLKMSKA
RTPDEVFESA AMCMHDSVGV RGGFVYWIVP AERIMQGLVW NGNGHRRVIS YPLEGDGLPA
LNGGTSLPDN LKAILLTHHE RHEGASLMDR ELRLKQFFVV RGYCLFPLVG SDFTGEICIL
RSGDRPSKMT PQEYMGYSQV SCVASASLDR VRLFDSLQLR ADELSLALWK NQQINLQLLQ
TERLAAVGQL AAGAAHEINN PLAIISARTQ LLESRENDEK KRRDLHQISE QIERISSILQ
SLMGFARPNA PQVINLDINS LLLKIIGLVE SIFQTHRIPI VQSLAPDLPL ILADANQLEQ
VFLNLVINAQ HAMEKEGGVL TVSSAFMPDG KRISISVRDT GTGISPENLS RIFDPFFSTK
SEGKGTGLGL STAYGIVTNH YGEIKVISTP GQGTEMIVVL PVSTPVTLPE KPVVRLETEC
AMPTATKGHR ILVVDDEQHI RDILSETLRE AGYVVETAPN GDEGVRKLRS GSFDLILLDI
RMPIHSGLDV LKLLRRNGGA PPVIIITGLA SSEELEEALR LGAAKCIRKP FHLKTLLSDI
SGILHSGCPA NN
|
|---|
| |