Gene Dbac_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1377 
Symbol 
ID8377042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp1548355 
End bp1548960 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID645000603 
ProductShikimate kinase 
Protein accessionYP_003157889 
Protein GI256829161 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.149071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTTC GTCCGGGACA GTTCAAACGT GAACCTTTTT CCCTGCAAAA GAAAAATATT 
TACCTGCTTG GCATGCGGGC CAGCGGTAAG ACCACCGTGG GCAAGGCGTT GGCCGAGGCC 
CTTGGATGCG CTTTCGTCGA TACCGACGCC CTGGTCGTGA CCGAGGCCGG GCAGGATATC 
GACGCCATCG TGGCCGGGCA GGGCTGGGAT GCCTTTCGAA GCCTGGAGGA AGCTGCCTTG 
TCCCGCGCGG CGGAGCTTCC GGGCAAGGTC ATCTCCACGG GCGGCGGCAT CGTCCTCTCC 
CCGGCCAACC GCGACCTCAT GTACCGCACC GGGGTCAGCT TCTATCTGGC AGCCGACGCC 
GGGCTTCTCA TCGCGCGCAT GCTGCGCGAC CCTAATGCCG CCCAGCGTCC GGCCCTGACC 
CCCCTGGCAC TGCACGACGA GGTGGCGGCG ATCATGAGCG AACGCGAAGC CCTGTACATG 
GCCAGCATGG ACCACATGCT CCAGGCCCAC AGGAGCGTGG AGGAGCTGGT CGACGACGCG 
CTCGTGGCCC TGGGGCTCAA AGAGTGGGAT TATTCCGAGA AAGAACGGGT GCTGGACCGC 
TACTAA
 
Protein sequence
MTFRPGQFKR EPFSLQKKNI YLLGMRASGK TTVGKALAEA LGCAFVDTDA LVVTEAGQDI 
DAIVAGQGWD AFRSLEEAAL SRAAELPGKV ISTGGGIVLS PANRDLMYRT GVSFYLAADA 
GLLIARMLRD PNAAQRPALT PLALHDEVAA IMSEREALYM ASMDHMLQAH RSVEELVDDA 
LVALGLKEWD YSEKERVLDR Y