Gene Dbac_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1196 
Symbol 
ID8376860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1317282 
End bp1317830 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content54% 
IMG OID645000429 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_003157716 
Protein GI256828988 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.406056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGCGA CAAAAGAACT CATCTTGGAA CACCAGGACA TCGAGCTCAT GCTGGAAATC 
CTGAAAACCG TGTCAACGCG ACTGCTCGAC GGAGGTGCGG TCCCCCCCGA ACATCTTGAA
GGCATCCTCG AATTTTTGAC GGTTTTCGTC GACAAGTGCC ATCACGGCAA AGAAGAGAAA
TACCTGTTTC GGGCCATGGA AGCCGCCGGA GTGGACCATA TTACCGGGCA CATCGGAGTC
TTGATCTATG AGCACGAACA GGGCCGCATC CATATCGCCC GGATCAAAAA TGGACTGGCG
GGGACCTTGG GCGTGCCGGA CATGACAGAA GTGCGGGCTG CCGCGGCGGA TTATGTGGAG
CTGATGGTCC AGCATATCAC CACGGAAAAC ACGGATGTTT TTCCCATGGC TGACAAGATC
CTGGATGCAG GCTCGGTCGG CAAGCTTTGC GAAAACTTCA AGAAGCACGA GCGAGAGTGG
ATTGGAGAAG GAAAACACGA AGAGTTCCAT ACGCTTCTGG AAACGCTGCA GGACGTGTAT
CTGAAGTGA
 
Protein sequence
MHATKELILE HQDIELMLEI LKTVSTRLLD GGAVPPEHLE GILEFLTVFV DKCHHGKEEK 
YLFRAMEAAG VDHITGHIGV LIYEHEQGRI HIARIKNGLA GTLGVPDMTE VRAAAADYVE
LMVQHITTEN TDVFPMADKI LDAGSVGKLC ENFKKHEREW IGEGKHEEFH TLLETLQDVY
LK