Gene Dbac_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1185 
Symbol 
ID8376849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1301513 
End bp1302289 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content59% 
IMG OID645000418 
ProductSNARE associated Golgi protein 
Protein accessionYP_003157705 
Protein GI256828977 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAACT CCGACACCAA TGCTTCCGCG CCTTCCTCCT TTACAGGCTT GAAAAGACCC 
TTGCTGGGGA TCGCGGCAGG TATTGTGTTC GTCGGCCTCG TCCTCGTAGT GCTCGTTTAT
TTCGATCTTC ACGAGCAGTT GGTCGTCTTG CTGGAATGGA TAGACACGCA GGGTGCCATG
GCGGCAGTCT ACTTCATCCT GCTGATGGCG GCGGTGGTGG TGCTGTTGTT GCCGGGGATA
TTCCTGACCA CAGGCGCCGG CTTTGTGTTC GGTCTCATCG AGGGAACCGT GCTGGTCGTG
GCGGGTACTG TCCTCGGTGC GTCCCTGGCC TTCCTGATCG CGCGCCACCT GTTTGGCGAG
CGCGCCTCGC GGTTCATCCT CAGGCGCAGC AATCTGCAGG TCGTCAGCGA CGAGATGGCG
CGGCACGACT TCAAAGTCGT CATGCTCACA AGGCTGATTC CGTTCTTTCC GGGCAAGATT
TCCAATTATT TCTTCGGTCT GACAAAGTTC ACCTTCAAGG GCTTCGTGCT GGGCTCGCTC
ATCGGTTTCA TTCCGTTTTC GCTGCACAAT GTCTACCTGG GCTCGATCGC CGCCGACCTG
GCAAGCCTGA GCCGGGGCGA GGTGGAGCGT TCGCCGCTAC AGTGGGCTTT TTATGGCCTG
GGGTTCGTCG CGACGATCGT TGCGCTGCTC TATTTTAACA ATCTGGCGCG GCGGGCTCTG
GCGGCGTATT CGCAGGAAAG CGGCAAAGCG GGGACAGAAA CCAAGGACAG CTCATGA
 
Protein sequence
MINSDTNASA PSSFTGLKRP LLGIAAGIVF VGLVLVVLVY FDLHEQLVVL LEWIDTQGAM 
AAVYFILLMA AVVVLLLPGI FLTTGAGFVF GLIEGTVLVV AGTVLGASLA FLIARHLFGE
RASRFILRRS NLQVVSDEMA RHDFKVVMLT RLIPFFPGKI SNYFFGLTKF TFKGFVLGSL
IGFIPFSLHN VYLGSIAADL ASLSRGEVER SPLQWAFYGL GFVATIVALL YFNNLARRAL
AAYSQESGKA GTETKDSS