Gene Dbac_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1174 
Symbol 
ID8376838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp1288974 
End bp1289657 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content55% 
IMG OID645000407 
ProductThiJ/PfpI domain protein 
Protein accessionYP_003157694 
Protein GI256828966 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.64094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC TTATTGTTCT TACTTCTCAT GACCAACTTG GCAACACCGG AAAGAAGACT 
GGTTTCTGGC TGGAAGAGTT CGTGTCTCCC TATTACGTGT TCAAGGATGC CGGAGCAAAG 
ATCACGCTGG CCTCGCCCAA GGGGGGCCGA CCGCCGCTTG ATCCGACCAG CGAACTTCCC 
GAATATCTGA CCGAATCAAC CAAACGCTAC AGCAAAGACA AGGCTGCGCA GGCTGAACTT 
GCTGACACGA AAAAGCTAGC CGATGTGTCC GCGGACGATT TCGACGCAGT CTTCTACCCC 
GGCGGTCATG GTCCGATGTG GGACCTTACC GATGACAGGG TCTCCATTGC GCTGATCGAA 
GCCTTCCTAC AGGCCAACAA GCCGGTCGGT GCGGTGTGTC ACGCGCCGGT CTCGTTAGTC 
AATGTACGCG GGAAAGACGG CGAATATCTG GTCAAAAGTA AACGCGTAAC CGGTTTCACC 
AATACAGAAG AAGAAGCAGC AGGCTTGACC GAGGTCGTAC CTTTTCTGTT GGAAGACCGA 
CTTAAAGAAC GCGGTGCTCT CTACAGCAAG GGTGCCGACT GGGCGCCGTA CGTACAGGTG 
GATGGCAAGC TTGTGACCGG CCAGAACCCG GCCTCCTCGA GACCCGCTGC GGAAGAGGTG 
CTGAAGCTGC TTCGTTCTGC TTGA
 
Protein sequence
MKILIVLTSH DQLGNTGKKT GFWLEEFVSP YYVFKDAGAK ITLASPKGGR PPLDPTSELP 
EYLTESTKRY SKDKAAQAEL ADTKKLADVS ADDFDAVFYP GGHGPMWDLT DDRVSIALIE 
AFLQANKPVG AVCHAPVSLV NVRGKDGEYL VKSKRVTGFT NTEEEAAGLT EVVPFLLEDR 
LKERGALYSK GADWAPYVQV DGKLVTGQNP ASSRPAAEEV LKLLRSA