Gene Dbac_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1162 
Symbol 
ID8376826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1276662 
End bp1277486 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content56% 
IMG OID645000395 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003157682 
Protein GI256828954 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGA TGACCACCAA AGACGGAACA GAAATCTACT ACAAAGACTG GGGCGGCGGA 
CAACCAGTGG TGTTTAGCCA CGGTTGGCCT CTCAATTCAG ACAGTTGGGA GGCGCAGATG
TTGTTTCTGA GCTCTCACGG TTTCAGGTGC ATTGCCCATG ACCGTCGCGG TCATGGGCGA
TCGAGCCAGC CATGGGGTGG AAACGACATG AACACCTATG CCGACGACCT CGCGGAACTC
ATGGAGTCGC TTGATCTGAA GTCAGCCGCT CTTGTCGGGT TTTCAGCCGG CGGGGGTGAG
ATTGCCCGCT ACATTGGCCG TCATGGCACG CAGCGTGTGT CCAAGGCCGC TTTGATTGCC
GCCGTCCCGC CACTCATGCT GAAAACTTCG GCCAATCCAG GGGGACTGTC GATGGAGACG
TTCGACGAGA TTCGCAAAGG ATCCATCGTC GACCGCTCAC AGTTTTACAA GGATCTTGCC
GGCGGTCCGT TTTTCGGAGC CAACAGGTCT GGCGCCAGCG TCTCCCAAGG CATGATCGAC
TCGTTCTGGC TGCAGGGGAT GCTGGCTGGG CACAAGAACA CTTTCGACTG CATCAAGGCG
TTCTCCGAAA CCGACTTCAC GGAAGATCTC AAGAAATTTG ATGTGCCGAC GCTCATCGTT
CACGGCGACG ATGACCAGAT TGTGCCCATC GACGCAGCGG CCAAGCACGC ATCGACACTG
GTCAAGAATT CTGTGCTGAA AATTTACGAG GGCGCGCCCC ATGGTCTCGC CTACACGCAC
AAAGACAGGC TCAACGCTGA CCTGCTGGCA TTTTTGTCGA CGTGA
 
Protein sequence
MSMMTTKDGT EIYYKDWGGG QPVVFSHGWP LNSDSWEAQM LFLSSHGFRC IAHDRRGHGR 
SSQPWGGNDM NTYADDLAEL MESLDLKSAA LVGFSAGGGE IARYIGRHGT QRVSKAALIA
AVPPLMLKTS ANPGGLSMET FDEIRKGSIV DRSQFYKDLA GGPFFGANRS GASVSQGMID
SFWLQGMLAG HKNTFDCIKA FSETDFTEDL KKFDVPTLIV HGDDDQIVPI DAAAKHASTL
VKNSVLKIYE GAPHGLAYTH KDRLNADLLA FLST